RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ARL10Q8N8L6 244 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 CPT1CQ8TCG5 803 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 PDCD6IPQ8WUM4 868 aaKnown RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 BTN2A2Q8WVV5 523 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 APOBEC4Q8WW27 367 aaKnown RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 TMEM159Q96B96 161 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 SLC17A9Q9BYT1 436 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 DONSONQ9NYP3 566 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 DKK3Q9UBP4 350 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 GGT7Q9UJ14 662 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 PNMA8BQ9ULN7 279 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-220ENST00000557037 RNF215Q9Y6U7 377 aa12.83□□□□□ -0.36
PSEN1-220ENST00000557037 RNF103O00237 685 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 MCF2LO15068 1137 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 CD2BP2O95400 341 aaKnown RBP12.82□□□□□ -0.36
PSEN1-220ENST00000557037 IGLV3-27P01718 113 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 CTSLP07711 333 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 PRF1P14222 555 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
PSEN1-220ENST00000557037 UGT1A3P35503 534 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 ARSDP51689 593 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 TBX4P57082 545 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 CDC20Q12834 499 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 SEPT6Q14141 434 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 DLG2Q15700 870 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 MS4A13Q5J8X5 152 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 CCNJLQ8IV13 435 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 CCDC65Q8IXS2 484 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 CACNA2D3Q8IZS8 1091 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 PCDH19Q8TAB3 1148 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 SLC13A1Q9BZW2 595 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 SEMA6CQ9H3T2 930 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 DOLKQ9UPQ8 538 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 ABCA2Q9BZC7 2435 aa12.82□□□□□ -0.36
PSEN1-220ENST00000557037 FPGTO14772 594 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 ALOX15BO15296 676 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 EXOC3O60645 756 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
PSEN1-220ENST00000557037 ITGB7P26010 798 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 AP3M2P53677 418 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 DLG4P78352 724 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 ADIGQ0VDE8 80 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 ATP1A1-AS1Q5TC04 95 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 LGI2Q8N0V4 545 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 GPBAR1Q8TDU6 330 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 PARD3BQ8TEW8 1205 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 TATDN2Q93075 761 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
PSEN1-220ENST00000557037 EPAS1Q99814 870 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 DDX50Q9BQ39 737 aaKnown RBP12.81□□□□□ -0.36
PSEN1-220ENST00000557037 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 LRRC4Q9HBW1 653 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 GPR34Q9UPC5 381 aa12.81□□□□□ -0.36
PSEN1-220ENST00000557037 SPTLC2O15270 562 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 ATP9BO43861 1147 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 MOCS2O96007 188 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 HLA-DRAP01903 254 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 RPN1P04843 607 aaKnown RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 PIK3CAP42336 1068 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 THOP1P52888 689 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 MRPL49Q13405 166 aaKnown RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 SLITRK4Q8IW52 837 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 PRR7Q8TB68 274 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 TAF4BQ92750 862 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 TCTN2Q96GX1 697 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 SLC45A3Q96JT2 553 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 CDH19Q9H159 772 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 APOBEC3GQ9HC16 384 aaKnown RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 ABCC13Q9NSE7 274 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 XPO7Q9UIA9 1087 aaKnown RBP12.8□□□□□ -0.36
PSEN1-220ENST00000557037 NAALADL1Q9UQQ1 740 aa12.8□□□□□ -0.36
PSEN1-220ENST00000557037 AKAP9Q99996 3911 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 RAD1O60671 282 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 CHRNA3P32297 505 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 RPS21P63220 83 aaKnown RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 CCDC15Q0P6D6 951 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 NAA30Q147X3 362 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 ZACNQ401N2 412 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 MSANTD2Q6P1R3 559 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 C16orf46Q6P387 395 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 EPM2AIP1Q7L775 607 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 SIX6OS1Q8N1H7 587 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 GRIN3AQ8TCU5 1115 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 SCG3Q8WXD2 468 aaKnown RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 AZIN2Q96A70 460 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms