RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PCDHA3Q9Y5H8 950 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CPQQ9Y646 472 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 GVINP1Q7Z2Y8 2422 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 KMT2EQ8IZD2 1858 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 TRIOO75962 3097 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GREB1Q4ZG55 1949 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 LRRD1A4D1F6 860 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CTAGE9A4FU28 777 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 C3orf70A6NLC5 250 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 KCNU1A8MYU2 1149 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PSTPIP1O43586 416 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 NARSO43776 548 aaKnown RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PRPSAP2O60256 369 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CEP104O60308 925 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GREM1O60565 184 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 TSPAN3O60637 253 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PAGE1O75459 146 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PRAMEF12O95522 483 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 OLFM2O95897 454 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 KLKB1P03952 638 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 DCNP07585 359 aaKnown RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CTSBP07858 339 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 HNRNPA1P09651 372 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 HDCP19113 662 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 VAMP1P23763 118 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 KDELR1P24390 212 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 IL4RP24394 825 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 HOXA9P31269 272 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 SLC6A4P31645 630 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 L1CAMP32004 1257 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GBP1P32455 592 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ADRA1BP35368 520 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PCK1P35558 622 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ATP5C1P36542 298 aaKnown RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 NUMBP49757 651 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 SGSHP51688 502 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 EPHA5P54756 1037 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CDH6P55285 790 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 RWDD2BP57060 319 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 DYNLT1P63172 113 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 MRPS25P82663 173 aaKnown RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GSTM4Q03013 218 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 LMNB2Q03252 620 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 DPYSL3Q14195 570 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CPSF6Q16630 551 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ZNF528Q3MIS6 628 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PPP6R3Q5H9R7 873 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ERMARDQ5T6L9 678 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PIK3R6Q5UE93 754 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 KAZNQ674X7 775 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 RAP1GAP2Q684P5 730 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 NADSYN1Q6IA69 706 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PAOXQ6QHF9 649 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 NPNTQ6UXI9 565 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 SPOCD1Q6ZMY3 1216 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 BEND5Q7L4P6 421 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GET4Q7L5D6 327 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ZAR1Q86SH2 424 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CIR1Q86X95 450 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CREG2Q8IUH2 290 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 DENND1CQ8IV53 801 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CCDC50Q8IVM0 306 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 TP53INP2Q8IXH6 220 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 KATNAL2Q8IYT4 538 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PQLC3Q8N755 202 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PDZD8Q8NEN9 1154 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GIMAP7Q8NHV1 300 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 OVCA2Q8WZ82 227 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 MRPS31Q92665 395 aaKnown RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 EZH1Q92800 747 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 RNF34Q969K3 372 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 HAUS1Q96CS2 278 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 SHDQ96IW2 340 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CEP295NLQ96MC4 621 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 LRRC3BQ96PB8 259 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 RTKNQ9BST9 563 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 NACA2Q9H009 215 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 SIK2Q9H0K1 926 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 WDCPQ9H6R7 721 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 C10orf88Q9H8K7 445 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 TBC1D17Q9HA65 648 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CYP4F12Q9HCS2 524 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ETNK2Q9NVF9 386 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ZDHHC7Q9NXF8 308 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 ARHGEF38Q9NXL2 777 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 DLGAP2Q9P1A6 1054 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 GPN3Q9UHW5 284 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CA14Q9ULX7 337 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 AP4E1Q9UPM8 1137 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 MRPS23Q9Y3D9 190 aaKnown RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 HS3ST4Q9Y661 456 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 SAR1BQ9Y6B6 198 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 MYO15AQ9UKN7 3530 aa5.47□□□□□ -1.53
ATXN3-244ENST00000556898 EP300Q09472 2414 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-244ENST00000556898 CACNA1BQ00975 2339 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms