RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MT-CO1P00395 513 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 NME1P15531 152 aaKnown RBP12.16□□□□□ -0.46
ACTN1-221ENST00000556571 TGM2P21980 687 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 IRAK1P51617 712 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 CLCN6P51797 869 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 PDCLQ13371 301 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 STIM1Q13586 685 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 FZD2Q14332 565 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 C5orf22Q49AR2 442 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 TMEM259Q4ZIN3 620 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 SEL1L3Q68CR1 1132 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-221ENST00000556571 ZNF548Q8NEK5 533 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-221ENST00000556571 ZNF606Q8WXB4 792 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 ATXN7L3BQ96GX2 97 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 PPP1R16AQ96I34 528 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 FEM1CQ96JP0 617 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 BMFQ96LC9 184 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 KREMEN1Q96MU8 473 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 SLC17A9Q9BYT1 436 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 GPR27Q9NS67 375 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 IPO11Q9UI26 975 aaKnown RBP12.16□□□□□ -0.46
ACTN1-221ENST00000556571 SALL4Q9UJQ4 1053 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 HS3ST4Q9Y661 456 aa12.16□□□□□ -0.46
ACTN1-221ENST00000556571 TDRD6O60522 2096 aaKnown RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 AHCTF1Q8WYP5 2266 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 EME2A4GXA9 379 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 K7ERQ8 282 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 TPP1O14773 563 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 THAP12O43422 761 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 SLC28A2O43868 658 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 HSF2BPO75031 334 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 PAGE1O75459 146 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 TCEA3O75764 348 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 WISP1O95388 367 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 MLLT3P42568 568 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 RABIFP47224 123 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 RPS21P63220 83 aaKnown RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 CDKN3Q16667 212 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 OR6B2Q6IFH4 312 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 KIAA1161Q6NSJ0 714 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 CCDC81Q6ZN84 652 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 RBM44Q6ZP01 1051 aaKnown RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 EFL1Q7Z2Z2 1120 aaKnown RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 C14orf80Q86SX3 495 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 ZSCAN30Q86W11 494 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 PARGQ86W56 976 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 ARL14Q8N4G2 192 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 SPATA20Q8TB22 786 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 PSMB7Q99436 277 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
ACTN1-221ENST00000556571 CAAP1Q9H8G2 361 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 VPS51Q9UID3 782 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 ENTPD2Q9Y5L3 495 aa12.15□□□□□ -0.46
ACTN1-221ENST00000556571 POM121BA6NF01 834 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 CDRT15L2A8MXV6 281 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 AQP9O43315 295 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 SNAP91O60641 907 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 PAK4O96013 591 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 RHOCP08134 193 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 RRM1P23921 792 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 GNA15P30679 374 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 PPP1R2P41236 205 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 RPIAP49247 311 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 NEK3P51956 506 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 NME3Q13232 169 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 NR0B2Q15466 257 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 GUSBP11Q6P575 273 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 SETD3Q86TU7 594 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 DCAF4L2Q8NA75 395 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 CHST14Q8NCH0 376 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 WDR36Q8NI36 951 aaKnown RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 WDR48Q8TAF3 677 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 GRIN3AQ8TCU5 1115 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 PRR11Q96HE9 360 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 IL12RB2Q99665 862 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 INTS2Q9H0H0 1204 aaKnown RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 SIK2Q9H0K1 926 aa12.14□□□□□ -0.47
ACTN1-221ENST00000556571 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 NYNRINQ9P2P1 1898 aaKnown RBP12.14□□□□□ -0.47
ACTN1-221ENST00000556571 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
ACTN1-221ENST00000556571 RNF103O00237 685 aa12.13□□□□□ -0.47
ACTN1-221ENST00000556571 FPGTO14772 594 aa12.13□□□□□ -0.47
ACTN1-221ENST00000556571 AP1G1O43747 822 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms