RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 NFE2L3Q9Y4A8 694 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 PLXND1Q9Y4D7 1925 aa9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 TNRC6BQ9UPQ9 1833 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-204ENST00000556268 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 FREM2Q5SZK8 3169 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 PRRT4C9JH25 899 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 CLIC2O15247 247 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 CBFA2T3O75081 653 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 TBX18O95935 607 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 CFIP05156 583 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 HOXB2P14652 356 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 ACO1P21399 889 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 AP3M2P53677 418 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 SLC5A3P53794 718 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 ATXN3P54252 364 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 KDSRQ06136 332 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 TRPC3Q13507 836 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 ENPP2Q13822 863 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 TRIP6Q15654 476 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 ANO4Q32M45 955 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 PLEKHN1Q494U1 663 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 FAM26FQ5R3K3 315 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 C10orf76Q5T2E6 689 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 EGFLAMQ63HQ2 1017 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 KLHDC10Q6PID8 442 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 CCNI2Q6ZMN8 369 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 LCNL1Q6ZST4 164 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 MINDY1Q8N5J2 469 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 TRIML1Q8N9V2 468 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 ADAMTS14Q8WXS8 1223 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 PPP1R14AQ96A00 147 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 P2RY11Q96G91 374 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 TNIP3Q96KP6 325 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 MRGPRX1Q96LB2 322 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 SDCBP2Q9H190 292 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 ZSCAN16Q9H4T2 348 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 FAM124BQ9H5Z6 455 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 OSER1Q9NX31 292 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 SCML2Q9UQR0 700 aa9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 HELZP42694 1942 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-204ENST00000556268 KNL1Q8NG31 2342 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 NBEAQ8NFP9 2946 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 UBE4BO95155 1302 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 WASH3PC4AMC7 463 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 SH3BP5O60239 455 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 TLR5O60602 858 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 PPP6R2O75170 966 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 VNN1O95497 513 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 RPN1P04843 607 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 TYRP14679 529 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 ATP5C1P36542 298 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 WASP42768 502 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 CYP2J2P51589 502 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 ZNF132P52740 706 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 KNOP1Q1ED39 458 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 SGSM1Q2NKQ1 1148 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 KRTAP19-4Q3LI73 84 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 BICRALQ6AI39 1079 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 GRAMD4Q6IC98 578 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 MRM1Q6IN84 353 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 SDE2Q6IQ49 451 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 POMZP3Q6PJE2 187 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 TOGARAM2Q6ZUX3 1019 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 UNC13DQ70J99 1090 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 GLRX5Q86SX6 157 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 ACOT1Q86TX2 421 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 UNC93AQ86WB7 457 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 PROSER1Q86XN7 944 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 IQUBQ8NA54 791 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 OR2I1PQ8NGU4 316 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 SMARCD1Q96GM5 515 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 CAMK1GQ96NX5 476 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 HNRNPABQ99729 332 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 BBS2Q9BXC9 721 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 FBXO44Q9H4M3 255 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 SMYD3Q9H7B4 428 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 ITM2CQ9NQX7 267 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 TLR8Q9NR97 1041 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 SLC27A6Q9Y2P4 619 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 PCDH15Q96QU1 1955 aa9.4□□□□□ -0.9
GTF2A1-204ENST00000556268 ASXL3Q9C0F0 2248 aa9.4□□□□□ -0.91
GTF2A1-204ENST00000556268 ATP8B3O60423 1300 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 ATXN2Q99700 1313 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 A0A1W2PQJ5 194 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 SPTLC2O15270 562 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 NUAK1O60285 661 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 IGLV3-19P01714 112 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 DBHP09172 617 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 CASP4P49662 377 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 ASIC1P78348 528 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 SCAPQ12770 1279 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 IFRD2Q12894 506 aaPredicted RBP9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 SSPNQ14714 243 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 ZNF667Q5HYK9 610 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms