RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 KLHL4Q9C0H6 718 aa15.08■□□□□ 0
CUX1-215ENST00000556210 ALG9Q9H6U8 611 aa15.08■□□□□ 0
CUX1-215ENST00000556210 COPS7BQ9H9Q2 264 aaPredicted RBP15.08■□□□□ 0
CUX1-215ENST00000556210 COPG2Q9UBF2 871 aa15.08■□□□□ 0
CUX1-215ENST00000556210 A6NHS1 94 aa15.08■□□□□ 0
CUX1-215ENST00000556210 AKAP10O43572 662 aa15.08■□□□□ 0
CUX1-215ENST00000556210 CCDC166P0CW27 439 aa15.08■□□□□ 0
CUX1-215ENST00000556210 CHRM3P20309 590 aa15.08■□□□□ 0
CUX1-215ENST00000556210 CYLC2Q14093 348 aaPredicted RBP15.08■□□□□ 0
CUX1-215ENST00000556210 PRKD1Q15139 912 aaPredicted RBP15.08■□□□□ 0
CUX1-215ENST00000556210 DPYSL2Q16555 572 aa15.08■□□□□ 0
CUX1-215ENST00000556210 TIGD5Q53EQ6 642 aa15.08■□□□□ 0
CUX1-215ENST00000556210 NEPROQ6NW34 567 aa15.08■□□□□ 0
CUX1-215ENST00000556210 ARHGAP36Q6ZRI8 547 aa15.08■□□□□ 0
CUX1-215ENST00000556210 STRADAQ7RTN6 431 aa15.08■□□□□ 0
CUX1-215ENST00000556210 PDZD8Q8NEN9 1154 aa15.08■□□□□ 0
CUX1-215ENST00000556210 EVPLQ92817 2033 aa15.08■□□□□ 0
CUX1-215ENST00000556210 NDFIP2Q9NV92 336 aa15.08■□□□□ 0
CUX1-215ENST00000556210 DDX18Q9NVP1 670 aaKnown RBP15.08■□□□□ 0
CUX1-215ENST00000556210 CASQ2O14958 399 aaPredicted RBP15.08■□□□□ 0
CUX1-215ENST00000556210 PAGE1O75459 146 aa15.08■□□□□ 0
CUX1-215ENST00000556210 IL4RP24394 825 aa15.08■□□□□ 0
CUX1-215ENST00000556210 EEF1B2P24534 225 aaKnown RBP15.08■□□□□ 0
CUX1-215ENST00000556210 OR1E1P30953 314 aa15.08■□□□□ 0
CUX1-215ENST00000556210 RARS2Q5T160 578 aaKnown RBP15.08■□□□□ 0
CUX1-215ENST00000556210 TAC4Q86UU9 113 aa15.08■□□□□ 0
CUX1-215ENST00000556210 ARRDC4Q8NCT1 418 aa15.08■□□□□ 0
CUX1-215ENST00000556210 NXNL1Q96CM4 212 aa15.08■□□□□ 0
CUX1-215ENST00000556210 AAR2Q9Y312 384 aaKnown RBP15.08■□□□□ 0
CUX1-215ENST00000556210 SNX13Q9Y5W8 968 aa15.08■□□□□ 0
CUX1-215ENST00000556210 CBX4O00257 560 aa15.07■□□□□ 0
CUX1-215ENST00000556210 SIN3BO75182 1162 aa15.07■□□□□ 0
CUX1-215ENST00000556210 RFPL1O75677 317 aa15.07■□□□□ 0
CUX1-215ENST00000556210 FBXO21O94952 628 aa15.07■□□□□ 0
CUX1-215ENST00000556210 PFKMP08237 780 aa15.07■□□□□ 0
CUX1-215ENST00000556210 PSMD5Q16401 504 aa15.07■□□□□ 0
CUX1-215ENST00000556210 NRF1Q16656 503 aa15.07■□□□□ 0
CUX1-215ENST00000556210 TNFAIP8L3Q5GJ75 292 aa15.07■□□□□ 0
CUX1-215ENST00000556210 GPRIN1Q7Z2K8 1008 aa15.07■□□□□ 0
CUX1-215ENST00000556210 TUBGCP3Q96CW5 907 aa15.07■□□□□ 0
CUX1-215ENST00000556210 POMKQ9H5K3 350 aa15.07■□□□□ 0
CUX1-215ENST00000556210 ZFYVE28Q9HCC9 887 aa15.07■□□□□ 0
CUX1-215ENST00000556210 FZD10Q9ULW2 581 aa15.07■□□□□ 0
CUX1-215ENST00000556210 NHSQ6T4R5 1651 aa15.07■□□□□ 0
CUX1-215ENST00000556210 MTSS1O43312 755 aa15.07■□□□□ 0
CUX1-215ENST00000556210 GCATO75600 419 aa15.07■□□□□ 0
CUX1-215ENST00000556210 DDHD2O94830 711 aa15.07■□□□□ 0
CUX1-215ENST00000556210 DNAJB2P25686 324 aa15.07■□□□□ 0
CUX1-215ENST00000556210 CRHR1P34998 444 aa15.07■□□□□ 0
CUX1-215ENST00000556210 TEX44Q53QW1 395 aa15.07■□□□□ 0
CUX1-215ENST00000556210 ZRANB3Q5FWF4 1079 aa15.07■□□□□ 0
CUX1-215ENST00000556210 SPANXN3Q5MJ09 141 aa15.07■□□□□ 0
CUX1-215ENST00000556210 ENDOVQ8N8Q3 282 aaKnown RBP15.07■□□□□ 0
CUX1-215ENST00000556210 MPP4Q96JB8 637 aa15.07■□□□□ 0
CUX1-215ENST00000556210 TBL1YQ9BQ87 522 aa15.07■□□□□ 0
CUX1-215ENST00000556210 PADI3Q9ULW8 664 aa15.07■□□□□ 0
CUX1-215ENST00000556210 ARL5CA6NH57 179 aa15.07■□□□□ 0
CUX1-215ENST00000556210 TMEM233B4DJY2 109 aa15.07■□□□□ 0
CUX1-215ENST00000556210 SNX2O60749 519 aa15.07■□□□□ 0
CUX1-215ENST00000556210 PROZP22891 400 aa15.07■□□□□ 0
CUX1-215ENST00000556210 PTPN9P43378 593 aa15.07■□□□□ 0
CUX1-215ENST00000556210 RPS6KA3P51812 740 aa15.07■□□□□ 0
CUX1-215ENST00000556210 CRYBB1P53674 252 aaPredicted RBP15.07■□□□□ 0
CUX1-215ENST00000556210 ARL13AQ5H913 290 aaPredicted RBP15.07■□□□□ 0
CUX1-215ENST00000556210 C6orf10Q5SRN2 563 aa15.07■□□□□ 0
CUX1-215ENST00000556210 ARHGAP17Q68EM7 881 aa15.07■□□□□ 0
CUX1-215ENST00000556210 LINC00523Q86TU6 105 aa15.07■□□□□ 0
CUX1-215ENST00000556210 DQX1Q8TE96 717 aaKnown RBP15.07■□□□□ 0
CUX1-215ENST00000556210 SNRNP27Q8WVK2 155 aaKnown RBP15.07■□□□□ 0
CUX1-215ENST00000556210 RCN3Q96D15 328 aa15.07■□□□□ 0
CUX1-215ENST00000556210 LENG8Q96PV6 779 aaPredicted RBP15.07■□□□□ 0
CUX1-215ENST00000556210 EGFL8Q99944 293 aa15.07■□□□□ 0
CUX1-215ENST00000556210 MUC3BQ9H195 1237 aa15.07■□□□□ 0
CUX1-215ENST00000556210 MORF4L1Q9UBU8 362 aa15.07■□□□□ 0
CUX1-215ENST00000556210 LNPEPQ9UIQ6 1025 aa15.07■□□□□ 0
CUX1-215ENST00000556210 HACD1B0YJ81 288 aa15.06■□□□□ 0
CUX1-215ENST00000556210 NDUFS3O75489 264 aa15.06■□□□□ 0
CUX1-215ENST00000556210 HNRNPCP07910 306 aaKnown RBP eCLIP15.06■□□□□ 07e-7■■□□□ 13.7
CUX1-215ENST00000556210 GABRB2P47870 512 aa15.06■□□□□ 0
CUX1-215ENST00000556210 CD151P48509 253 aa15.06■□□□□ 0
CUX1-215ENST00000556210 LRRC8BQ6P9F7 803 aa15.06■□□□□ 0
CUX1-215ENST00000556210 NET1Q7Z628 596 aaPredicted RBP15.06■□□□□ 0
CUX1-215ENST00000556210 TMEM209Q96SK2 561 aa15.06■□□□□ 0
CUX1-215ENST00000556210 NPAS2Q99743 824 aa15.06■□□□□ 0
CUX1-215ENST00000556210 GATA5Q9BWX5 397 aaPredicted RBP15.06■□□□□ 0
CUX1-215ENST00000556210 RHOBTB1O94844 696 aa15.06■□□□□ 0
CUX1-215ENST00000556210 PRKCGP05129 697 aa15.06■□□□□ 0
CUX1-215ENST00000556210 DLDP09622 509 aaKnown RBP15.06■□□□□ 0
CUX1-215ENST00000556210 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
CUX1-215ENST00000556210 AKR1A1P14550 325 aa15.06■□□□□ 0
CUX1-215ENST00000556210 CNTFP26441 200 aa15.06■□□□□ 0
CUX1-215ENST00000556210 RAB27AP51159 221 aa15.06■□□□□ 0
CUX1-215ENST00000556210 RBBP7Q16576 425 aa15.06■□□□□ 0
CUX1-215ENST00000556210 MARK2Q7KZI7 788 aaKnown RBP15.06■□□□□ 0
CUX1-215ENST00000556210 PHTF2Q8N3S3 785 aa15.06■□□□□ 0
CUX1-215ENST00000556210 SHCBP1Q8NEM2 672 aa15.06■□□□□ 0
CUX1-215ENST00000556210 OR6Y1Q8NGX8 325 aa15.06■□□□□ 0
CUX1-215ENST00000556210 NAT14Q8WUY8 206 aa15.06■□□□□ 0
CUX1-215ENST00000556210 SMIM35A0A1B0GVV1 85 aa15.06■□□□□ 0
CUX1-215ENST00000556210 OR51F1A6NGY5 319 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms