RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 AGAP11Q8TF27 550 aa24.67■■□□□ 1.54
TMEM260-207ENST00000555497 VPS39Q96JC1 886 aa24.67■■□□□ 1.54
TMEM260-207ENST00000555497 MRGPRX2Q96LB1 330 aa24.67■■□□□ 1.54
TMEM260-207ENST00000555497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.67■■□□□ 1.54
TMEM260-207ENST00000555497 A0A096LPK6 155 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 MTMR11A4FU01 709 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 OR6C75A6NL08 312 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 HAPLN1P10915 354 aaPredicted RBP24.66■■□□□ 1.54
TMEM260-207ENST00000555497 GABRB3P28472 473 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 CHRNA4P43681 627 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 SLC1A6P48664 564 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 GEMP55040 296 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 CSE1LP55060 971 aaKnown RBP24.66■■□□□ 1.54
TMEM260-207ENST00000555497 TAS1R1Q7RTX1 841 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 CLEC14AQ86T13 490 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 MIB1Q86YT6 1006 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 UMODL1-AS1Q8N2C9 162 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.66■■□□□ 1.54
TMEM260-207ENST00000555497 IGSF8Q969P0 613 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 HMCESQ96FZ2 354 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 NSL1Q96IY1 281 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 SLC2A6Q9UGQ3 507 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 J3KR12 359 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 ALDH2P05091 517 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 C2P06681 752 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 SLC2A3P11169 496 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 DNAJB2P25686 324 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 ARNTP27540 789 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 GRM3Q14832 879 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 RTP2Q5QGT7 225 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 ESRP1Q6NXG1 681 aaKnown RBP24.66■■□□□ 1.54
TMEM260-207ENST00000555497 EBF4Q9BQW3 602 aa24.66■■□□□ 1.54
TMEM260-207ENST00000555497 CPB1P15086 417 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 RASSF2P50749 326 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 PDPK2PQ6A1A2 396 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 RANBP10Q6VN20 620 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 ZC3HC1Q86WB0 502 aaKnown RBP24.65■■□□□ 1.54
TMEM260-207ENST00000555497 FAM126BQ8IXS8 530 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 SORT1Q99523 831 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 SEPT5Q99719 369 aaPredicted RBP24.65■■□□□ 1.54
TMEM260-207ENST00000555497 TLE6Q9H808 572 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 DNAJC16Q9Y2G8 782 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 SERPINE1P05121 402 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 HMBSP08397 361 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 RHOQP17081 205 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 CSRP3P50461 194 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 CDK18Q07002 472 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 MGAT5BQ3V5L5 792 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 FUT10Q6P4F1 479 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 FAM13CQ8NE31 585 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 ZYG11BQ9C0D3 744 aa24.65■■□□□ 1.54
TMEM260-207ENST00000555497 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.65■■□□□ 1.54
TMEM260-207ENST00000555497 TIMM44O43615 452 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 TBC1D4O60343 1298 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 MPOP05164 745 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 CPA3P15088 417 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 ARCN1P48444 511 aaKnown RBP24.64■■□□□ 1.54
TMEM260-207ENST00000555497 IHHQ14623 411 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 KRT72Q14CN4 511 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 E2F5Q15329 346 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 TRIP4Q15650 581 aaPredicted RBP24.64■■□□□ 1.54
TMEM260-207ENST00000555497 RAP1GAP2Q684P5 730 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 FBXL22Q6P050 247 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 LRRC49Q8IUZ0 686 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 BCL7CQ8WUZ0 217 aaPredicted RBP24.64■■□□□ 1.54
TMEM260-207ENST00000555497 MYEOVQ96EZ4 313 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 KLHL5Q96PQ7 755 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 TMEM248Q9NWD8 314 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 CLIC5Q9NZA1 410 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 MARCH2Q9P0N8 246 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 SLC39A10Q9ULF5 831 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 L3MBTL1Q9Y468 752 aa24.64■■□□□ 1.54
TMEM260-207ENST00000555497 SCN5AQ14524 2016 aa24.64■■□□□ 1.53
TMEM260-207ENST00000555497 IGLV3-10A0A075B6K4 115 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 VAPBO95292 243 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 AHSGP02765 367 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 GPR17Q13304 367 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 C10orf120Q5SQS8 335 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 FAM91A1Q658Y4 838 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 KDELC1Q6UW63 502 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 CIR1Q86X95 450 aaPredicted RBP24.63■■□□□ 1.53
TMEM260-207ENST00000555497 TREML1Q86YW5 311 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 DENND6AQ8IWF6 608 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 CRIPAKQ8N1N5 446 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 OR6Y1Q8NGX8 325 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 GPR22Q99680 433 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 ENTPD7Q9NQZ7 604 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 PPARGC1AQ9UBK2 798 aaKnown RBP24.63■■□□□ 1.53
TMEM260-207ENST00000555497 TCAF1Q9Y4C2 921 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 G3V2L1 256 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 NDST2P52849 883 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 MAXP61244 160 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 SLC10A7Q0GE19 358 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 DUSP4Q13115 394 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 ITGA9Q13797 1035 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 PCSK7Q16549 785 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 CCDC153Q494R4 210 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 FSD1LQ9BXM9 530 aa24.63■■□□□ 1.53
TMEM260-207ENST00000555497 CADM1Q9BY67 442 aaKnown RBP24.63■■□□□ 1.53
TMEM260-207ENST00000555497 WWP1Q9H0M0 922 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms