RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SERPINA13PQ6UXR4 307 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 ATPAF2Q8N5M1 289 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 CCDC33Q8N5R6 958 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 COG1Q8WTW3 980 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 FRMD8P1Q9BZ68 369 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 SP110Q9HB58 689 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 CACNA2D2Q9NY47 1150 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 UBA2Q9UBT2 640 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 SLC8A2Q9UPR5 921 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 SAR1BQ9Y6B6 198 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 EDDM13A0A1B0GTR0 161 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 TTC34A8MYJ7 566 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 KIF2AO00139 706 aaPredicted RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 FGGP02679 453 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 HOXB2P14652 356 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 CASQ1P31415 396 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 RENBPP51606 427 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 OTUD4Q01804 1114 aaKnown RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 LBRQ14739 615 aaKnown RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 PRKD1Q15139 912 aaPredicted RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 DRICH1Q6PGQ1 229 aaPredicted RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 SYT10Q6XYQ8 523 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 CCDC13Q8IYE1 715 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 PCDH20Q8N6Y1 951 aaKnown RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 CCNYQ8ND76 341 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 SLC35B2Q8TB61 432 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 TFB1MQ8WVM0 346 aaKnown RBP12.91□□□□□ -0.34
SYNE2-219ENST00000555323 LGMNQ99538 433 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 C1QTNF1Q9BXJ1 281 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 PRSS16Q9NQE7 514 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 AMACRQ9UHK6 382 aa12.91□□□□□ -0.34
SYNE2-219ENST00000555323 BCLAF3A2AJT9 711 aaKnown RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 MCF2LO15068 1137 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 MTSS1O43312 755 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 ZNF189O75820 626 aaPredicted RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 TMCC1O94876 653 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 EPHX1P07099 455 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 RBP3P10745 1247 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 HLA-EP13747 358 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CCNB1P14635 433 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 HOXA6P31267 233 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 HSPA9P38646 679 aaKnown RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CXCL12P48061 93 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CSNK1DP48730 415 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CCR3P51677 355 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 DGKEP52429 567 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 NUBP1P53384 320 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CCNG2Q16589 344 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 ACCSLQ4AC99 568 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CARD16Q5EG05 197 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 MARC1Q5VT66 337 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 C22orf39Q6P5X5 142 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CREG2Q8IUH2 290 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 CAMKK1Q8N5S9 505 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 OR2A12Q8NGT7 310 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 VOPP1Q96AW1 172 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 HAUS1Q96CS2 278 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 MS4A14Q96JA4 679 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 FBRSQ9HAH7 460 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 HOMER3Q9NSC5 361 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 C2orf42Q9NWW7 574 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
SYNE2-219ENST00000555323 FCF1Q9Y324 198 aaKnown RBP12.9□□□□□ -0.34
SYNE2-219ENST00000555323 ZNF185O15231 689 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 ALOX15BO15296 676 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 SYNCRIPO60506 623 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 SIN3BO75182 1162 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 GSRP00390 522 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 CR2P20023 1033 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 COL9A1P20849 921 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 WASP42768 502 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 SNRPD1P62314 119 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 AP1B1Q10567 949 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 STARD3Q14849 445 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 TMEM31Q5JXX7 168 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 ALG1LQ6GMV1 187 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 KIAA1211LQ6NV74 962 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms