RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 ACE2Q9BYF1 805 aaPredicted RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 MIR1-1HGQ9H1L0 117 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 TNKS2Q9H2K2 1166 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 SMOC1Q9H4F8 434 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 FZD4Q9ULV1 537 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 NENFQ9UMX5 172 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
SRP54-206ENST00000555317 KPNA3O00505 521 aaPredicted RBP12.34□□□□□ -0.43
SRP54-206ENST00000555317 SMAD6O43541 496 aaKnown RBP12.34□□□□□ -0.43
SRP54-206ENST00000555317 KDELR3O43731 214 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 PROSCO94903 275 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 FSBPO95073 299 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 CHRNA3P32297 505 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 ACSL1P33121 698 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 NDST2P52849 883 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 ARF5P84085 180 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 DPYSL2Q16555 572 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 DUOXA1Q1HG43 343 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 POM121L1PQ3SYA9 428 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 ODF2Q5BJF6 829 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 ARTNQ5T4W7 220 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 DCAF12L1Q5VU92 463 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 TCEAL6Q6IPX3 200 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 SLC41A1Q8IVJ1 513 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 CCDC170Q8IYT3 715 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 UMODL1-AS1Q8N2C9 162 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 OR14C36Q8NHC7 312 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 GRIN3AQ8TCU5 1115 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 NETO1Q8TDF5 533 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 CASKIN2Q8WXE0 1202 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 HMCESQ96FZ2 354 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 IL36AQ9UHA7 158 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 PILRBQ9UKJ0 227 aa12.34□□□□□ -0.43
SRP54-206ENST00000555317 FCF1Q9Y324 198 aaKnown RBP12.34□□□□□ -0.43
SRP54-206ENST00000555317 KNL1Q8NG31 2342 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 METTL12A8MUP2 240 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 DFFAO00273 331 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 KRT7P08729 469 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 RARAP10276 462 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 C7P10643 843 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 ERCC2P18074 760 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 TGM1P22735 817 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 IL1R2P27930 398 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 MAN1A1P33908 653 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 SERPINB6P35237 376 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 HCAR3P49019 387 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 ATXN3P54252 364 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 CDH6P55285 790 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 SNRPD1P62314 119 aaKnown RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 SLC25A11Q02978 314 aaKnown RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 RAD51Q06609 339 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 SERINC3Q13530 473 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 MESDQ14696 234 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 CARD16Q5EG05 197 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 TMCO3Q6UWJ1 677 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 LEKR1Q6ZMV7 388 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 DPY19L3Q6ZPD9 716 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 MAP7D3Q8IWC1 876 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 AADATQ8N5Z0 425 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 LZTR1Q8N653 840 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 KCTD6Q8NC69 237 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 OR2A12Q8NGT7 310 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 SLC35G2Q8TBE7 412 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 RFFLQ8WZ73 363 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 ISG20Q96AZ6 181 aaKnown RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 CELF6Q96J87 481 aaKnown RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 NEUROG2Q9H2A3 272 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 ZDHHC6Q9H6R6 413 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 SP110Q9HB58 689 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 CWC15Q9P013 229 aaKnown RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 UBA2Q9UBT2 640 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 SERGEFQ9UGK8 458 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 EVLQ9UI08 416 aaPredicted RBP12.33□□□□□ -0.44
SRP54-206ENST00000555317 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 PPM1HQ9ULR3 514 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 SPTBN2O15020 2390 aa12.33□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3DA0A087WVF3 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3IA0A087WXS9 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3KA0A087X1G2 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3FA6NER0 549 aaPredicted RBP12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3LB9A6J9 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 SLC7A4O43246 635 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TMCC1O94876 653 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 IGSF6O95976 241 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 GSRP00390 522 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TBC1D3HP0C7X1 549 aa12.32□□□□□ -0.44
SRP54-206ENST00000555317 TCF4P15884 667 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms