RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 C6orf118Q5T5N4 469 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 TTC39BQ5VTQ0 682 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 SYDE1Q6ZW31 735 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 KIAA0907Q7Z7F0 614 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 SETD3Q86TU7 594 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 ADHFE1Q8IWW8 467 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 IFT20Q8IY31 132 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ZNF366Q8N895 744 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 SNF8Q96H20 258 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 SP110Q9HB58 689 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ZDHHC18Q9NUE0 388 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 A0A0A0MRY4 1105 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 CFAP69A5D8W1 941 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ARHGAP42A6NI28 874 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 GOLGA8MH3BSY2 632 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ZBTB24O43167 697 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 TMEM63AO94886 807 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ADH1CP00326 375 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 PABPC1P11940 636 aaKnown RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 CCNB1P14635 433 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 CCNCP24863 283 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 PSMB4P28070 264 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 DGKGP49619 791 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 GALK1P51570 392 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 MAXP61244 160 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 TUBB4BP68371 445 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 OLIG2Q13516 323 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 CCNI2Q6ZMN8 369 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 CPT1BQ92523 772 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ZBTB9Q96C00 473 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 SPATA13Q96N96 652 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 TSGA13Q96PP4 275 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 MAGEH1Q9H213 219 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 RAB6BQ9NRW1 208 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 POLR3BQ9NW08 1133 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 KLHL8Q9P2G9 620 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 C5orf60A6NFR6 353 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 WASH3PC4AMC7 463 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 DNALI1O14645 258 aaPredicted RBP10.96□□□□□ -0.65
TDP1-211ENST00000555178 KDELR3O43731 214 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 PRAMEF11O60813 436 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 GCATO75600 419 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 HLA-DQB2P05538 268 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 CYTH1Q15438 398 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 RNASEH2BQ5TBB1 312 aaKnown RBP10.96□□□□□ -0.65
TDP1-211ENST00000555178 CPA6Q8N4T0 437 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 VOPP1Q96AW1 172 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 MYO19Q96H55 970 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 EXOC2Q96KP1 924 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 ACOX2Q99424 681 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 ETNK1Q9HBU6 452 aa10.96□□□□□ -0.65
TDP1-211ENST00000555178 KIAA1522Q9P206 1035 aaPredicted RBP10.96□□□□□ -0.65
TDP1-211ENST00000555178 FCF1Q9Y324 198 aaKnown RBP10.96□□□□□ -0.65
TDP1-211ENST00000555178 MATN3O15232 486 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 ZNF821O75541 412 aaPredicted RBP10.96□□□□□ -0.66
TDP1-211ENST00000555178 H2AFXP16104 143 aaPredicted RBP10.96□□□□□ -0.66
TDP1-211ENST00000555178 NFKB1P19838 968 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 CTHP32929 405 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 OXCT1P55809 520 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 YBEYP58557 167 aaPredicted RBP10.96□□□□□ -0.66
TDP1-211ENST00000555178 PTPRNQ16849 979 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 TEX44Q53QW1 395 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 UBAP2Q5T6F2 1119 aaKnown RBP10.96□□□□□ -0.66
TDP1-211ENST00000555178 MBLAC2Q68D91 279 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 ARHGEF18Q6ZSZ5 1173 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 PID1Q7Z2X4 250 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 KIAA1958Q8N8K9 716 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 TSEN2Q8NCE0 465 aaKnown RBP10.96□□□□□ -0.66
TDP1-211ENST00000555178 ART4Q93070 314 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 ASB2Q96Q27 587 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 UBP1Q9NZI7 540 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 PAK5Q9P286 719 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 IGSF9Q9P2J2 1179 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.66
TDP1-211ENST00000555178 PIAS3Q9Y6X2 628 aa10.96□□□□□ -0.66
TDP1-211ENST00000555178 SPECC1L-ADORA2AF8WAN1 911 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 BANF1O75531 89 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 CHRM1P11229 460 aaPredicted RBP10.95□□□□□ -0.66
TDP1-211ENST00000555178 TNFRSF8P28908 595 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 GKP32189 559 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 PLK1P53350 603 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 IFI35P80217 286 aaPredicted RBP10.95□□□□□ -0.66
TDP1-211ENST00000555178 TDGQ13569 410 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 PON2Q15165 354 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 HIBCHQ6NVY1 386 aaPredicted RBP10.95□□□□□ -0.66
TDP1-211ENST00000555178 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.95□□□□□ -0.66
TDP1-211ENST00000555178 SPATA22Q8NHS9 363 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 ANKRD7Q92527 254 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 MAML1Q92585 1016 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
TDP1-211ENST00000555178 TEKT5Q96M29 485 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 IL12RB2Q99665 862 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
TDP1-211ENST00000555178 NT5MQ9NPB1 228 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms