RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 VAT1Q99536 393 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CHRDQ9H2X0 955 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SEPT3Q9UH03 358 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SLCO3A1Q9UIG8 710 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 MTF2Q9Y483 593 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 STON1Q9Y6Q2 735 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 TARSL2A2RTX5 802 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 H7C0C1 242 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 LIASO43766 372 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 TMCC1O94876 653 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 CCNB1P14635 433 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 AOC1P19801 751 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 ATP5OP48047 213 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 STK19P49842 368 aaPredicted RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 SEC13P55735 322 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 AP1B1Q10567 949 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 LBRQ14739 615 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 DLG2Q15700 870 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 HNRNPA1L2Q32P51 320 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 C2orf27AQ580R0 203 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 EOGTQ5NDL2 527 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 HEATR6Q6AI08 1181 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 MAMSTRQ6ZN01 415 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 ADAT2Q7Z6V5 191 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 FRS2Q8WU20 508 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 CCDC114Q96M63 670 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 PSKH2Q96QS6 385 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 MMP17Q9ULZ9 603 aa16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 R3HDM2Q9Y2K5 976 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 NYNRINQ9P2P1 1898 aaKnown RBP16.74■□□□□ 0.27
SPTLC2-203ENST00000554901 EDDM13A0A1B0GTR0 161 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 STIP1P31948 543 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 IL12RB1P42701 662 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 NSUN2Q08J23 767 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 BYSLQ13895 437 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 CYP1B1Q16678 543 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 CWF19L1Q69YN2 538 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 C22orf39Q6P5X5 142 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 ALLCQ8N6M5 410 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 C12orf50Q8NA57 414 aaPredicted RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 HTR3CQ8WXA8 447 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 ZNF592Q92610 1267 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 IL12RB2Q99665 862 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 CINPQ9BW66 212 aaPredicted RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 FBRSQ9HAH7 460 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 DNPEPQ9ULA0 475 aa16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 DRG1Q9Y295 367 aaKnown RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 MUC22E2RYF6 1773 aaPredicted RBP16.73■□□□□ 0.27
SPTLC2-203ENST00000554901 KRIT1O00522 736 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 KLF8O95600 359 aaPredicted RBP16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 ITGAVP06756 1048 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 MMP13P45452 471 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 CSNK1DP48730 415 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 NUMBP49757 651 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 SLC10A7Q0GE19 358 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 ZNF235Q14590 738 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 STARD3Q14849 445 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 OASLQ15646 514 aaKnown RBP16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 ACCSLQ4AC99 568 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 DARS2Q6PI48 645 aaKnown RBP16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 SYT13Q7L8C5 426 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 SPEM1Q8N4L4 309 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 PRELID2Q8N945 189 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 ACOX2Q99424 681 aa16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 COL25A1Q9BXS0 654 aaPredicted RBP16.72■□□□□ 0.27
SPTLC2-203ENST00000554901 TTC34A8MYJ7 566 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 K7ERQ8 282 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 SMAD6O43541 496 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 NEBLO76041 1014 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 STK10O94804 968 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 GSRP00390 522 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 CES1P23141 567 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 RECQLP46063 649 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 RHOAP61586 193 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 SNRPD1P62314 119 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 LMNB2Q03252 620 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 CAMK2GQ13555 558 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 CYTH1Q15438 398 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 WHAMMP3Q1A5X7 153 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 RALGPS1Q5JS13 557 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 TXNDC5Q8NBS9 432 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 C1orf54Q8WWF1 131 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 PTPRN2Q92932 1015 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 USP29Q9HBJ7 922 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 FEZ2Q9UHY8 353 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 TRHDEQ9UKU6 1024 aa16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 FCF1Q9Y324 198 aaKnown RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
SPTLC2-203ENST00000554901 CCDC188H7C350 402 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 KCNK1O00180 336 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ALOX15BO15296 676 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 SYNCRIPO60506 623 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms