RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-213ENST00000554776 KIR2DS5A0A0G2JLQ3 304 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 C17orf100A8MU93 164 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 KCNJ18B7U540 433 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 KIR2DS3K7RE56 304 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 UGDHO60701 494 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 USO1O60763 962 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 TULP3O75386 442 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 RNASEH2AO75792 299 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 GFPT2O94808 682 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 F9P00740 461 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 URODP06132 367 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 PKMP14618 531 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 RGS2P41220 211 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 CASP2P42575 452 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 POLD2P49005 469 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 EIF5P55010 431 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 DCAF7P61962 342 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 GOLGA8FQ08AF8 430 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 TBL3Q12788 808 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 BYSLQ13895 437 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 TOMM20Q15388 145 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 TBCEQ15813 527 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 GPR162Q16538 588 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 BAK1Q16611 211 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 GXYLT1Q4G148 440 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 MIDNQ504T8 468 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 AWAT2Q6E213 333 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 TTLL5Q6EMB2 1281 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 CFAP161Q6P656 301 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 SLC30A9Q6PML9 568 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 LRIG3Q6UXM1 1119 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 DSTYKQ6XUX3 929 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 C4orf50Q6ZRC1 276 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 IRF2BP2Q7Z5L9 587 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 ARMC8Q8IUR7 673 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 ADGRF4Q8IZF3 695 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF366Q8N895 744 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 C9orf106Q8NAJ2 232 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 RFWD2Q8NHY2 731 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 MPLKIPQ8TAP9 179 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 KAT2AQ92830 837 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 ZBTB9Q96C00 473 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 MSI2Q96DH6 328 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 NEUROD6Q96NK8 337 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 FRMD8Q9BZ67 464 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 INTS2Q9H0H0 1204 aaKnown RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 PLEKHA5Q9HAU0 1116 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 SEMA4BQ9NPR2 832 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 SWAP70Q9UH65 585 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 SUFUQ9UMX1 484 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 DTX4Q9Y2E6 619 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 HS3ST3B1Q9Y662 390 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 ITIH6Q6UXX5 1313 aa3.37□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF335Q9H4Z2 1342 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-213ENST00000554776 A6NCN8 305 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CXorf65A6NEN9 183 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF814B7Z6K7 855 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 IFNL4K9M1U5 179 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 PER2O15055 1255 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CBX6O95503 412 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 METTL18O95568 372 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 TNNT1P13805 278 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 GSTM2P28161 218 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 TYK2P29597 1187 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 MAPK4P31152 587 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 ME1P48163 572 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 RPS6KA3P51812 740 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 RHAGQ02094 409 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 DCTN2Q13561 401 aaKnown RBP3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CAMK1Q14012 370 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 C10orf76Q5T2E6 689 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 ATF7IPQ6VMQ6 1270 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 TECPR1Q7Z6L1 1165 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CPLX4Q7Z7G2 160 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 DDIASQ8IXT1 998 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 NME8Q8N427 588 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 TMEM217Q8N7C4 229 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 PLD5Q8N7P1 536 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF548Q8NEK5 533 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CENPIQ92674 756 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-213ENST00000554776 EME1Q96AY2 570 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CLMNQ96JQ2 1002 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CD180Q99467 661 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 SDF4Q9BRK5 362 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 CENPOQ9BU64 300 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 TUBB6Q9BUF5 446 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 HEMGNQ9BXL5 484 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 FOXP1Q9H334 677 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-213ENST00000554776 VEZTQ9HBM0 779 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 SPAG4Q9NPE6 437 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 THSD1Q9NS62 852 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 KRT84Q9NSB2 600 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 ZBTB40Q9NUA8 1239 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 TMEM248Q9NWD8 314 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 MSRB1Q9NZV6 116 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 UPB1Q9UBR1 384 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 IPO11Q9UI26 975 aaKnown RBP3.36□□□□□ -1.87
SCFD1-213ENST00000554776 UTS2RQ9UKP6 389 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms