RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MFSD11O43934 449 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PGK1P00558 417 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TNNC2P02585 160 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CYBAP13498 195 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SMPD1P17405 629 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 AMPD1P23109 780 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 RBL1P28749 1068 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ADCY8P40145 1251 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CLCN4P51793 760 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF140P52738 457 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CDKL1Q00532 357 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 MBTPS1Q14703 1052 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TLR1Q15399 786 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TSNAXIP1Q2TAA8 658 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SLC36A3Q495N2 470 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PDCD4Q53EL6 469 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 EXOSC6Q5RKV6 272 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 C1orf53Q5VUE5 145 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PPP2R2DQ66LE6 453 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 LAIR2Q6ISS4 152 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 C17orf99Q6UX52 265 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 PRSS48Q7RTY5 328 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SERINC5Q86VE9 423 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ZBTB8OSQ8IWT0 167 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 SYCP3Q8IZU3 236 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 OR13J1Q8NGT2 312 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM143Q96AN5 459 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ERP27Q96DN0 273 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CERS2Q96G23 380 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 FAR2Q96K12 515 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC114Q96M63 670 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 NUSAP1Q9BXS6 441 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ACE2Q9BYF1 805 aaPredicted RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 ASPSCR1Q9BZE9 553 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 TIMMDC1Q9NPL8 285 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 NDE1Q9NXR1 346 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 UBAP1Q9NZ09 502 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 APPL1Q9UKG1 709 aa3.51□□□□□ -1.85
SEC23A-207ENST00000554615 OAS3Q9Y6K5 1087 aaKnown RBP3.51□□□□□ -1.85
SEC23A-207ENST00000554615 KCNE1BA0A087WTH5 132 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 AQP12BA6NM10 295 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM229AB2RXF0 380 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MATN3O15232 486 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RNASEH1O60930 286 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ADAMTS4O75173 837 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 EEDO75530 441 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CXCL8P10145 99 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 NCAM1P13591 858 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MTHFD2P13995 350 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 OGNP20774 298 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ACOT2P49753 483 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PTPN5P54829 565 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 POU4F1Q01851 419 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MPP3Q13368 585 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ELOAQ14241 798 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PLA2G4EQ3MJ16 856 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PARP15Q460N3 678 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ANKRD20A4Q4UJ75 823 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 DCAF6Q58WW2 860 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PDPK2PQ6A1A2 396 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TTC19Q6DKK2 380 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RFX8Q6ZV50 586 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TMC7Q7Z402 723 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CPLX4Q7Z7G2 160 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MTDHQ86UE4 582 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 AQP12AQ8IXF9 295 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 IL17RCQ8NAC3 791 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 DRAXINQ8NBI3 349 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 DEPTORQ8TB45 409 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC110Q8TBZ0 833 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SPPL2BQ8TCT7 592 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MAPK15Q8TD08 544 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RSAD2Q8WXG1 361 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TFAP2CQ92754 450 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 WNT8BQ93098 351 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 E2F7Q96AV8 911 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FKBP10Q96AY3 582 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CMTM5Q96DZ9 223 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FUBP3Q96I24 572 aaKnown RBP eCLIP3.5□□□□□ -1.856e-16■■■■□ 20.8
SEC23A-207ENST00000554615 HPDLQ96IR7 371 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZFRQ96KR1 1074 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MRGPRX2Q96LB1 330 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ATOH8Q96SQ7 321 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GDF15Q99988 308 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC40Q9H9A6 602 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PAK1IP1Q9NWT1 392 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 NKIRAS1Q9NYS0 192 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 POMPQ9Y244 141 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 OR51B4Q9Y5P0 310 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZFC3H1O60293 1989 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 H0YAE9 185 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TIMM44O43615 452 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 HAUS5O94927 633 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 F9P00740 461 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 UGT2B4P06133 528 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RBP3P10745 1247 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF23P17027 643 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 JUNDP17535 347 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PSMA2P25787 234 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ADRA1BP35368 520 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms