RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 KIAA0895LQ68EN5 471 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 SPECC1LQ69YQ0 1117 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3GQ6DHY5 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3CQ6IPX1 549 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 LEKR1Q6ZMV7 388 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 ADAT2Q7Z6V5 191 aaKnown RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 NLRP14Q86W24 1093 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 TBC1D3Q8IZP1 549 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 MINDY1Q8N5J2 469 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 OR2T34Q8NGX1 318 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 ARHGEF2Q92974 986 aaKnown RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 ISCUQ9H1K1 167 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 MAGEH1Q9H213 219 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 DEF6Q9H4E7 631 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 RETREG1Q9H6L5 497 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 ZNHIT6Q9NWK9 470 aaKnown RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 ZNF212Q9UDV6 495 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 SARDHQ9UL12 918 aa10.89□□□□□ -0.67
SHMT2-213ENST00000554600 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
SHMT2-213ENST00000554600 CDX4O14627 284 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 FGF10O15520 208 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 BUB1O43683 1085 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ZMPSTE24O75844 475 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 PRNPP04156 253 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 CD27P26842 260 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 MIPP30301 263 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 SSR1P43307 286 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 CSNK1EP49674 416 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 METAP1P53582 386 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ARF5P84085 180 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ZNF252P-AS1Q0IIN9 211 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 CNTN1Q12860 1018 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 GRIK2Q13002 908 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 TRIM14Q14142 442 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 TEAD4Q15561 434 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ARTNQ5T4W7 220 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ERMARDQ5T6L9 678 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ALKBH5Q6P6C2 394 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 RTL3Q8N8U3 475 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 OR2A12Q8NGT7 310 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 NCAPGQ9BPX3 1015 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 SNRNP25Q9BV90 132 aaKnown RBP10.88□□□□□ -0.67
SHMT2-213ENST00000554600 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 TM6SF2Q9BZW4 377 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 THAP2Q9H0W7 228 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ZDHHC6Q9H6R6 413 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 AASDHPPTQ9NRN7 309 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 IL36AQ9UHA7 158 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ANAPC7Q9UJX3 599 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 PPM1HQ9ULR3 514 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 NEU3Q9UQ49 428 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ACTL7AQ9Y615 435 aa10.88□□□□□ -0.67
SHMT2-213ENST00000554600 ATRXP46100 2492 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 A0A1B0GVT2 93 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 RASA4BC9J798 803 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 RASA4O43374 803 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 LRCH4O75427 683 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CTSLP07711 333 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 C7P10643 843 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 MAT2AP31153 395 aaKnown RBP10.87□□□□□ -0.67
SHMT2-213ENST00000554600 DRD3P35462 400 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 AFF3P51826 1226 aaKnown RBP10.87□□□□□ -0.67
SHMT2-213ENST00000554600 ADPRHP54922 357 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 C21orf59P57076 290 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CCDC15Q0P6D6 951 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CA9Q16790 459 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CARD16Q5EG05 197 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 ARSIQ5FYB1 569 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 PSAPL1Q6NUJ1 521 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 LAYNQ6UX15 382 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 DPY19L3Q6ZPD9 716 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 VSTM4Q8IW00 320 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 PCDH20Q8N6Y1 951 aaKnown RBP10.87□□□□□ -0.67
SHMT2-213ENST00000554600 DEFB124Q8NES8 71 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 OR8K1Q8NGG5 319 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 OR6K2Q8NGY2 324 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 FNIP1Q8TF40 1166 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 HSPH1Q92598 858 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 HMCESQ96FZ2 354 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 PPP1R16AQ96I34 528 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CNTNAP3BQ96NU0 1288 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 PEBP4Q96S96 227 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 KCTD15Q96SI1 283 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-213ENST00000554600 HEPHQ9BQS7 1158 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 ACE2Q9BYF1 805 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CNTNAP3Q9BZ76 1288 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 TRIM5Q9C035 493 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 ZDHHC5Q9C0B5 715 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 CEP44Q9C0F1 390 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 ZWILCHQ9H900 591 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 TM9SF3Q9HD45 589 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 DONSONQ9NYP3 566 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 ARHGAP20Q9P2F6 1191 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 SLCO1B1Q9Y6L6 691 aa10.87□□□□□ -0.67
SHMT2-213ENST00000554600 PKD1L2Q7Z442 2459 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 ZSCAN5CA6NGD5 496 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms