RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 JAMLQ86YT9 394 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 CDKL3Q8IVW4 592 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-208ENST00000553868 ARID3BQ8IVW6 561 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-208ENST00000553868 LZTR1Q8N653 840 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 SLC35B2Q8TB61 432 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 TPSD1Q9BZJ3 242 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 RETREG1Q9H6L5 497 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 ANKZF1Q9H8Y5 726 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 FBRSL1Q9HCM7 1045 aaKnown RBP14.82□□□□□ -0.04
SHMT2-208ENST00000553868 SCUBE2Q9NQ36 999 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 ARGLU1Q9NWB6 273 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-208ENST00000553868 PPARGC1AQ9UBK2 798 aaKnown RBP14.82□□□□□ -0.04
SHMT2-208ENST00000553868 LSM7Q9UK45 103 aaKnown RBP14.82□□□□□ -0.04
SHMT2-208ENST00000553868 HEY1Q9Y5J3 304 aa14.82□□□□□ -0.04
SHMT2-208ENST00000553868 HACD1B0YJ81 288 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 E9PAM4 449 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 F5H5T6 163 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 FAM72CH0Y354 149 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 H7C0C1 242 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 NDC80O14777 642 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 TTI1O43156 1089 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ACSL4O60488 711 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ATG13O75143 517 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 STC2O76061 302 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 CKMP06732 381 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 RBP3P10745 1247 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ENGP17813 658 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ERCC2P18074 760 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 MX2P20592 715 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ATP5OP48047 213 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 DGKEP52429 567 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 CYP4F8P98187 520 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 PDK1Q15118 436 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 TMEM196Q5HYL7 178 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 MS4A13Q5J8X5 152 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 FAM72AQ5TYM5 149 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 MANEALQ5VSG8 457 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 NCBP2-AS2Q69YL0 99 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 TXNDC8Q6A555 127 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 FAM72DQ6L9T8 149 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 WDR93Q6P2C0 686 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 CCNI2Q6ZMN8 369 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-208ENST00000553868 FAM72BQ86X60 149 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ARL14EPQ8N8R7 260 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-208ENST00000553868 E2F7Q96AV8 911 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 BRD8Q9H0E9 1235 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 RNF38Q9H0F5 515 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 TASP1Q9H6P5 420 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 DNPEPQ9ULA0 475 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 ZNF510Q9Y2H8 683 aa14.81□□□□□ -0.04
SHMT2-208ENST00000553868 WASH4PA8MWX3 477 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 PPP1R12AO14974 1030 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 ERLIN1O75477 346 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 PECAM1P16284 738 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 RHOQP17081 205 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 CORO1AP31146 461 aaKnown RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 STIP1P31948 543 aaKnown RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 AVPR1AP37288 418 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 PTGIRP43119 386 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 KCNJ1P48048 391 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 GUCY2DQ02846 1103 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 AUHQ13825 339 aaKnown RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 NAA30Q147X3 362 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 OASLQ15646 514 aaKnown RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 RABGAP1LQ5R372 815 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 GPR158Q5T848 1215 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 PIK3R6Q5UE93 754 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 RAP1GAP2Q684P5 730 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 DARS2Q6PI48 645 aaKnown RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 ARMCX6Q7L4S7 300 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 MAB21L3Q8N8X9 362 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 CCDC89Q8N998 374 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 EIF1ADQ8N9N8 165 aaKnown RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 CAMK1GQ96NX5 476 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 UBL7Q96S82 380 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-208ENST00000553868 PARD6BQ9BYG5 372 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 ZYG11BQ9C0D3 744 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 FAM114A2Q9NRY5 505 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 TMEM74BQ9NUR3 256 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 SNX10Q9Y5X0 201 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 CPQQ9Y646 472 aa14.8□□□□□ -0.04
SHMT2-208ENST00000553868 IGLV3-10A0A075B6K4 115 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 OTOL1A6NHN0 477 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 SGK1O00141 431 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 STK10O94804 968 aaKnown RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 APBB3O95704 486 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 IRF1P10914 325 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 TACR2P21452 398 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 TNFRSF8P28908 595 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ACTN2P35609 894 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 DRG2P55039 364 aaKnown RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 SLC7A5Q01650 507 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 GBE1Q04446 702 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 GRSF1Q12849 480 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 LMAN2Q12907 356 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 CUL1Q13616 776 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 PTK6Q13882 451 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 BRD3Q15059 726 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ZNF423Q2M1K9 1284 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms