RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 KDELR3O43731 214 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 CFIP05156 583 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 SERPINF2P08697 491 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 ZNF75DP51815 510 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 YBEYP58557 167 aaPredicted RBP20.78■□□□□ 0.92
FOXA1-203ENST00000553751 SLC25A11Q02978 314 aaKnown RBP20.78■□□□□ 0.92
FOXA1-203ENST00000553751 PUM1Q14671 1186 aaKnown RBP eCLIP20.78■□□□□ 0.92
FOXA1-203ENST00000553751 DPYSL2Q16555 572 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 SMTNL2Q2TAL5 461 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 PARP15Q460N3 678 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 PPP6R3Q5H9R7 873 aaPredicted RBP20.78■□□□□ 0.92
FOXA1-203ENST00000553751 KCNT1Q5JUK3 1230 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 FAM46CQ5VWP2 391 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 PCDH20Q8N6Y1 951 aaKnown RBP20.78■□□□□ 0.92
FOXA1-203ENST00000553751 TC2NQ8N9U0 490 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 CHST14Q8NCH0 376 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 CTNNBL1Q8WYA6 563 aaPredicted RBP20.78■□□□□ 0.92
FOXA1-203ENST00000553751 HMCESQ96FZ2 354 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 CCDC42Q96M95 316 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 KLC2Q9H0B6 622 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 SPTLC3Q9NUV7 552 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 SUSD2Q9UGT4 822 aa20.78■□□□□ 0.92
FOXA1-203ENST00000553751 CACNA1EQ15878 2313 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 C1QTNF3-AMACRE9PGA6 284 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 PLK4O00444 970 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 H2AFZP0C0S5 128 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 CHRNA3P32297 505 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 ADPRHP54922 357 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 GEMIN4P57678 1058 aaKnown RBP20.77■□□□□ 0.92
FOXA1-203ENST00000553751 STPG1Q5TH74 334 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 TXNRD3NBQ6F5E7 133 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 LEKR1Q6ZMV7 388 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 DPY19L3Q6ZPD9 716 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 H2AFVQ71UI9 128 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 ZCCHC9Q8N567 271 aaKnown RBP20.77■□□□□ 0.92
FOXA1-203ENST00000553751 TMIEQ8NEW7 156 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 C1orf216Q8TAB5 229 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 BIRC7Q96CA5 298 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 MRFAP1L1Q96HT8 127 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 RTKNQ9BST9 563 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 NUSAP1Q9BXS6 441 aaKnown RBP20.77■□□□□ 0.92
FOXA1-203ENST00000553751 LRRC19Q9H756 370 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 ZWILCHQ9H900 591 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 FSCN3Q9NQT6 498 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 CTTNBP2NLQ9P2B4 639 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 UVRAGQ9P2Y5 699 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 EIF2B4Q9UI10 523 aaKnown RBP20.77■□□□□ 0.92
FOXA1-203ENST00000553751 HPCAL4Q9UM19 191 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 SLC6A14Q9UN76 642 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 FARP1Q9Y4F1 1045 aaPredicted RBP20.77■□□□□ 0.92
FOXA1-203ENST00000553751 SLCO1B1Q9Y6L6 691 aa20.77■□□□□ 0.92
FOXA1-203ENST00000553751 ZSCAN5CA6NGD5 496 aaPredicted RBP20.76■□□□□ 0.91
FOXA1-203ENST00000553751 MYO1FO00160 1098 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 RNF103O00237 685 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 IGHV4-34P06331 123 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 TMEM253P0C7T8 217 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 RARAP10276 462 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 RECQLP46063 649 aaPredicted RBP20.76■□□□□ 0.91
FOXA1-203ENST00000553751 HCAR3P49019 387 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 ZNF135P52742 658 aaPredicted RBP20.76■□□□□ 0.91
FOXA1-203ENST00000553751 SERINC3Q13530 473 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 DPYSQ14117 519 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 POM121L1PQ3SYA9 428 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 BOLA3Q53S33 107 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 AGBL4Q5VU57 503 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 KIAA0895LQ68EN5 471 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 NCEH1Q6PIU2 408 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 OR2T34Q8NGX1 318 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 GRIN3AQ8TCU5 1115 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 TEKT4Q8WW24 435 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 SNX19Q92543 992 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 ISG20Q96AZ6 181 aaKnown RBP20.76■□□□□ 0.91
FOXA1-203ENST00000553751 MIR1-1HGQ9H1L0 117 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.76■□□□□ 0.91
FOXA1-203ENST00000553751 CWC15Q9P013 229 aaKnown RBP20.76■□□□□ 0.91
FOXA1-203ENST00000553751 WASF2Q9Y6W5 498 aa20.76■□□□□ 0.91
FOXA1-203ENST00000553751 FAM47DPA6NHR8 397 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 LRRC72A6NJI9 287 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 CDX4O14627 284 aaPredicted RBP20.75■□□□□ 0.91
FOXA1-203ENST00000553751 SLC7A4O43246 635 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 FSBPO95073 299 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 PRNPP04156 253 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 GNSP15586 552 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 ENGP17813 658 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 ERCC2P18074 760 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 NDST2P52849 883 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 CNTN1Q12860 1018 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 CARD16Q5EG05 197 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 AFMIDQ63HM1 303 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.75■□□□□ 0.91
FOXA1-203ENST00000553751 ZNF354CQ86Y25 554 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 CPNE8Q86YQ8 564 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 NPWQ8N729 165 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 HSPH1Q92598 858 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 CELF6Q96J87 481 aaKnown RBP20.75■□□□□ 0.91
FOXA1-203ENST00000553751 ORAI3Q9BRQ5 295 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 TM6SF2Q9BZW4 377 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 OSGEPQ9NPF4 335 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 DONSONQ9NYP3 566 aa20.75■□□□□ 0.91
FOXA1-203ENST00000553751 IL36AQ9UHA7 158 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms