RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 KCTD11Q693B1 232 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 TRIM68Q6AZZ1 485 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
APEX1-205ENST00000553555 VITQ6UXI7 678 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 RELL1Q8IUW5 271 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 MFSD6LQ8IWD5 586 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 PGBD5Q8N414 524 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 ZNF557Q8N988 423 aaPredicted RBP13.99□□□□□ -0.17
APEX1-205ENST00000553555 SMRP1Q8NCR6 262 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 ASIC4Q96FT7 647 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 NECTIN4Q96NY8 510 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 MLPHQ9BV36 600 aaPredicted RBP13.99□□□□□ -0.17
APEX1-205ENST00000553555 PHACTR1Q9C0D0 580 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 SLC25A51Q9H1U9 297 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 DNAJC17Q9NVM6 304 aaKnown RBP13.99□□□□□ -0.17
APEX1-205ENST00000553555 THG1LQ9NWX6 298 aaKnown RBP13.99□□□□□ -0.17
APEX1-205ENST00000553555 CD207Q9UJ71 328 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 ACTL7AQ9Y615 435 aa13.99□□□□□ -0.17
APEX1-205ENST00000553555 ERI2A8K979 691 aaKnown RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 E7ESA3 106 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 ALOX15BO15296 676 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 EIF3HO15372 352 aaKnown RBP eCLIP13.98□□□□□ -0.17
APEX1-205ENST00000553555 PSMD3O43242 534 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SNAP91O60641 907 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SUN1O94901 812 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 AP2A1O95782 977 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 CD160O95971 181 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 CYP17A1P05093 508 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SARNPP82979 210 aaKnown RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 CYTH1Q15438 398 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 UAP1Q16222 522 aaPredicted RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 HIF1AQ16665 826 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 PLEKHG6Q3KR16 790 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 PRPF38BQ5VTL8 546 aaKnown RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 CENPUQ71F23 418 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 CAND1Q86VP6 1230 aaKnown RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 PDIK1LQ8N165 341 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 DCAF4L2Q8NA75 395 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 ST13P5Q8NFI4 369 aaPredicted RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 SUSD6Q92537 303 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 OXNAD1Q96HP4 312 aaPredicted RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 SERPINB12Q96P63 405 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 FAM83CQ9BQN1 747 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SLC2A11Q9BYW1 496 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 PLA2G2FQ9BZM2 168 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SAYSD1Q9NPB0 183 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SEPT3Q9UH03 358 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 VPS51Q9UID3 782 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 FBXO10Q9UK96 956 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 INTS6Q9UL03 887 aaKnown RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 AAR2Q9Y312 384 aaKnown RBP13.98□□□□□ -0.17
APEX1-205ENST00000553555 TTLL3Q9Y4R7 772 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 C5orf42Q9H799 3197 aa13.98□□□□□ -0.17
APEX1-205ENST00000553555 SASH3O75995 380 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ANXA9O76027 345 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ADH5P11766 374 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 HLA-FP30511 346 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 HSD17B3P37058 310 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MAGEA4P43358 317 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ITKQ08881 620 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PDIA2Q13087 525 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ZNF235Q14590 738 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PDGFRLQ15198 375 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MSS51Q4VC12 460 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 INO80DQ53TQ3 878 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ZNF534Q76KX8 674 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 TRMT10CQ7L0Y3 403 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 SPATA22Q8NHS9 363 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ACDQ96AP0 544 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ELSPBP1Q96BH3 223 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 IMP4Q96G21 291 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ZFYVE19Q96K21 471 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PPP1R2P1Q96PQ5 205 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PSKH2Q96QS6 385 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 C2orf49Q9BVC5 232 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ABCB8Q9NUT2 735 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 USP15Q9Y4E8 981 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 SZT2Q5T011 3432 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 GOLGA6CA6NDK9 693 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 GOLGA6BA6NDN3 693 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MUSKO15146 869 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 HOXC11O43248 304 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 AVILO75366 819 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 NFATC1O95644 943 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MT-CYBP00156 380 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ADH1CP00326 375 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 GOLGA6DP0CG33 693 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MLNP12872 115 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ARSAP15289 507 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 GRIA1P42261 906 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 GEMP55040 296 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MAXP61244 160 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 NIPAL4Q0D2K0 466 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 SPARCL1Q14515 664 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PITRM1Q5JRX3 1037 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms