RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 DNA2P51530 1060 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 ZNF143P52747 638 aaPredicted RBP18.61■□□□□ 0.57
SHMT2-206ENST00000553529 OXCT1P55809 520 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 MAMLD1Q13495 774 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 LRRC73Q5JTD7 316 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 SLCO6A1Q86UG4 719 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 ARHGEF2Q92974 986 aaKnown RBP18.61■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D31Q96DN5 1066 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 SERAC1Q96JX3 654 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 ACE2Q9BYF1 805 aaPredicted RBP18.61■□□□□ 0.57
SHMT2-206ENST00000553529 OSBPL2Q9H1P3 480 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 SLC32A1Q9H598 525 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 PCOLCE2Q9UKZ9 415 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 FZD10Q9ULW2 581 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 PAXBP1Q9Y5B6 917 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 UPK3BL1B0FP48 263 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 UPK3BL2E5RIL1 263 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 SERPINC1P01008 464 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 RHOQP17081 205 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 FANCCQ00597 558 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 ATXN7L2Q5T6C5 722 aaPredicted RBP18.6■□□□□ 0.57
SHMT2-206ENST00000553529 SEL1L3Q68CR1 1132 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 CYP4V2Q6ZWL3 525 aaPredicted RBP18.6■□□□□ 0.57
SHMT2-206ENST00000553529 ADAT2Q7Z6V5 191 aaKnown RBP18.6■□□□□ 0.57
SHMT2-206ENST00000553529 SLFN11Q7Z7L1 901 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 SPATS2Q86XZ4 545 aaKnown RBP18.6■□□□□ 0.57
SHMT2-206ENST00000553529 TMEM121BQ9BXQ6 578 aaPredicted RBP18.6■□□□□ 0.57
SHMT2-206ENST00000553529 TMEM248Q9NWD8 314 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 ITM2BQ9Y287 266 aa18.6■□□□□ 0.57
SHMT2-206ENST00000553529 PCNX2A6NKB5 2137 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 CER1O95813 267 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 PBX1P40424 430 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 CCNHP51946 323 aaPredicted RBP18.59■□□□□ 0.57
SHMT2-206ENST00000553529 CLDN6P56747 220 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 RACK1P63244 317 aaKnown RBP18.59■□□□□ 0.57
SHMT2-206ENST00000553529 SHC2P98077 582 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 NRG1Q02297 640 aaPredicted RBP18.59■□□□□ 0.57
SHMT2-206ENST00000553529 MTA1Q13330 715 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 TRIP6Q15654 476 aaKnown RBP18.59■□□□□ 0.57
SHMT2-206ENST00000553529 ARL13BQ3SXY8 428 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 LRSAM1Q6UWE0 723 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 TMC6Q7Z403 805 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 TP53INP2Q8IXH6 220 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 BAHD1Q8TBE0 780 aaPredicted RBP18.59■□□□□ 0.57
SHMT2-206ENST00000553529 CPLX3Q8WVH0 158 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 NTAN1Q96AB6 310 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 HMCESQ96FZ2 354 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 ZDHHC6Q9H6R6 413 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 TOR4AQ9NXH8 423 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 IL36AQ9UHA7 158 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 PCSK1NQ9UHG2 260 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 ZFR2Q9UPR6 939 aaKnown RBP18.59■□□□□ 0.57
SHMT2-206ENST00000553529 MFHAS1Q9Y4C4 1052 aa18.59■□□□□ 0.57
SHMT2-206ENST00000553529 C1QTNF3-AMACRE9PGA6 284 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 SLC31A1O15431 190 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 LATO43561 262 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 RNGTTO60942 597 aaKnown RBP18.58■□□□□ 0.56
SHMT2-206ENST00000553529 FTLP02792 175 aaPredicted RBP18.58■□□□□ 0.56
SHMT2-206ENST00000553529 ATXN1LP0C7T5 689 aaKnown RBP18.58■□□□□ 0.56
SHMT2-206ENST00000553529 FTH1P19P0C7X4 201 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 ITIH2P19823 946 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 PSMA2P25787 234 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 CCR5P51681 352 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 SCAPQ12770 1279 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 FGL2Q14314 439 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 TEAD4Q15561 434 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 ZSCAN23Q3MJ62 389 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 HGSNATQ68CP4 663 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 DCUN1D2Q6PH85 259 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 CPNE8Q86YQ8 564 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 CELF6Q96J87 481 aaKnown RBP18.58■□□□□ 0.56
SHMT2-206ENST00000553529 ZDHHC5Q9C0B5 715 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 OSGEPQ9NPF4 335 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 AIPL1Q9NZN9 384 aa18.58■□□□□ 0.56
SHMT2-206ENST00000553529 WDFY3Q8IZQ1 3526 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 ASPMQ8IZT6 3477 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 A0A1W2PQC6 194 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 A0A1W2PQU0 124 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 VILLO15195 856 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 ALOX15BO15296 676 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 INSIG1O15503 277 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 SPINT1O43278 529 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 CD38P28907 300 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 EPHB2P29323 1055 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 ABL2P42684 1182 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 CLDN2P57739 230 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 KLHL30Q0D2K2 578 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 BNIP3Q12983 259 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 ST3GAL2Q16842 350 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF423Q2M1K9 1284 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 FILIP1LQ4L180 1135 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 CCDC157Q569K6 752 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 PLEKHA7Q6IQ23 1121 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 PARS2Q7L3T8 475 aaKnown RBP18.57■□□□□ 0.56
SHMT2-206ENST00000553529 RYBPQ8N488 228 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-206ENST00000553529 ZNF653Q96CK0 615 aa18.57■□□□□ 0.56
SHMT2-206ENST00000553529 BTBD6Q96KE9 485 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms