RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ZNF252P-AS1Q0IIN9 211 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 INO80DQ53TQ3 878 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-204ENST00000553324 CARD16Q5EG05 197 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 KIAA0895LQ68EN5 471 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 C22orf39Q6P5X5 142 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-204ENST00000553324 ZNF354CQ86Y25 554 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 AADATQ8N5Z0 425 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 OR14C36Q8NHC7 312 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 CTNNBL1Q8WYA6 563 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-204ENST00000553324 BIRC7Q96CA5 298 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 PPP1R16AQ96I34 528 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 NUP85Q9BW27 656 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 TRIM7Q9C029 511 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 ZWILCHQ9H900 591 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 UVRAGQ9P2Y5 699 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 IL36AQ9UHA7 158 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 EIF2B4Q9UI10 523 aaKnown RBP15.65■□□□□ 0.1
SHMT2-204ENST00000553324 ANAPC7Q9UJX3 599 aa15.65■□□□□ 0.1
SHMT2-204ENST00000553324 ATXN2Q99700 1313 aaKnown RBP15.65■□□□□ 0.1
SHMT2-204ENST00000553324 MUC22E2RYF6 1773 aaPredicted RBP15.64■□□□□ 0.1
SHMT2-204ENST00000553324 LAMA1P25391 3075 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 CDX4O14627 284 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-204ENST00000553324 BUB1O43683 1085 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 MFAP3LO75121 409 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 FSBPO95073 299 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 NUDT1P36639 197 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 DNA2P51530 1060 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 CCR5P51681 352 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 AFF3P51826 1226 aaKnown RBP15.64■□□□□ 0.09
SHMT2-204ENST00000553324 TEAD4Q15561 434 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 ASTE1Q2TB18 679 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-204ENST00000553324 RALGAPA1Q6GYQ0 2036 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 NCEH1Q6PIU2 408 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 IL27RAQ6UWB1 636 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 RFX8Q6ZV50 586 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 LZTR1Q8N653 840 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 SNX19Q92543 992 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 FAM131CQ96AQ9 280 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 SKA1Q96BD8 255 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 LRIG1Q96JA1 1093 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 HEPHQ9BQS7 1158 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 SNRNP25Q9BV90 132 aaKnown RBP15.64■□□□□ 0.09
SHMT2-204ENST00000553324 SERGEFQ9UGK8 458 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 SARDHQ9UL12 918 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 GON4LQ3T8J9 2241 aa15.64■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3DA0A087WVF3 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3IA0A087WXS9 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3EA0A087X179 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3KA0A087X1G2 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 DCDC2BA2VCK2 349 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3FA6NER0 549 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3LB9A6J9 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 RASA4BC9J798 803 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TM4SF5O14894 197 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 RASA4O43374 803 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 ZNF821O75541 412 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3HP0C7X1 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 DRD3P35462 400 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 ARL4AP40617 200 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 ADPRHP54922 357 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 ADKP55263 362 aaKnown RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 SNRPD1P62314 119 aaKnown RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 SERINC3Q13530 473 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 HADHQ16836 314 aaKnown RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 ARSIQ5FYB1 569 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 PPP6R3Q5H9R7 873 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3GQ6DHY5 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3CQ6IPX1 549 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 NEK5Q6P3R8 708 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 DPY19L3Q6ZPD9 716 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TBC1D3Q8IZP1 549 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 ZCCHC9Q8N567 271 aaKnown RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 C1orf216Q8TAB5 229 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TEKT4Q8WW24 435 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 PEBP4Q96S96 227 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 GTPBP2Q9BX10 602 aaKnown RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 TNKS2Q9H2K2 1166 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 NHEJ1Q9H9Q4 299 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-204ENST00000553324 CTTNBP2NLQ9P2B4 639 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 NENFQ9UMX5 172 aa15.63■□□□□ 0.09
SHMT2-204ENST00000553324 CEP250Q9BV73 2442 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 A0A1W2PPC4 97 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 ARHGAP42A6NI28 874 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 H3BRJ5 948 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 KPNA3O00505 521 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 PLRG1O43660 514 aaKnown RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 POP4O95707 220 aaKnown RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 CD160O95971 181 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 GSRP00390 522 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 MAPK8P45983 427 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 RACK1P63244 317 aaKnown RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 RAD51Q06609 339 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 TBX2Q13207 712 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 SLC14A1Q13336 389 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 DPYSL2Q16555 572 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 PRPF39Q86UA1 669 aaKnown RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 ZNF564Q8TBZ8 553 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-204ENST00000553324 HMCESQ96FZ2 354 aa15.62■□□□□ 0.09
SHMT2-204ENST00000553324 KCTD15Q96SI1 283 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms