RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MFAP4P55083 255 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 PSG6Q00889 435 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 CFHR3Q02985 330 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 LMAN2Q12907 356 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 PLAC9Q5JTB6 97 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 TMEM63BQ5T3F8 832 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 SERTAD4-AS1Q5TG53 156 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 SLC30A9Q6PML9 568 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 KIRREL2Q6UWL6 708 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 FAM43BQ6ZT52 329 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 DENND5BQ6ZUT9 1274 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 WDR53Q7Z5U6 358 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 GPR149Q86SP6 731 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 LNX2Q8N448 690 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 PSPC1Q8WXF1 523 aaKnown RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 RMDN1Q96DB5 314 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 FBXL20Q96IG2 436 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 HIC2Q96JB3 615 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 PBKQ96KB5 322 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 GBP5Q96PP8 586 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 SLC38A3Q99624 504 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 DESI2Q9BSY9 194 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 ABHD14AQ9BUJ0 271 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 DEF6Q9H4E7 631 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 LTB4R2Q9NPC1 389 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 DECR2Q9NUI1 292 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 CWC25Q9NXE8 425 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 ARL15Q9NXU5 204 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 C5AR2Q9P296 337 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 NENFQ9UMX5 172 aa6.08□□□□□ -1.44
SCFD1-208ENST00000553278 ZFP37Q9Y6Q3 630 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-208ENST00000553278 SPATA31A1Q5TZJ5 1347 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 TMEM247A6NEH6 219 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 NPIPB6E9PJ23 425 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 PI4K2BG5E9Z4 385 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 SNAP23O00161 211 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 TAF4O00268 1085 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 PSMA7O14818 248 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 NUAK1O60285 661 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 LPXNO60711 386 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 FARP2O94887 1054 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 ADAP00813 363 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 HLA-DQA2P01906 255 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 CHRM2P08172 466 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 KRT10P13645 584 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 IFNAR1P17181 557 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 TGM2P21980 687 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 SFPQP23246 707 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 TYK2P29597 1187 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 STAT2P52630 851 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 YWHAZP63104 245 aaKnown RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 GAB1Q13480 694 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 VEPH1Q14D04 833 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 PTPRRQ15256 657 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 ZSCAN23Q3MJ62 389 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 FBXO43Q4G163 708 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 C11orf88Q6PI97 169 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 Q6ZSN1 163 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 CHST3Q7LGC8 479 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 PRSS45Q7RTY3 260 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 CCDC91Q7Z6B0 441 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 NEK8Q86SG6 692 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 CEP57L1Q8IYX8 460 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 AMER2Q8N7J2 671 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 SCAIQ8N9R8 606 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 MMABQ96EY8 250 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 ZNF845Q96IR2 970 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 ADAM2Q99965 735 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 GPATCH1Q9BRR8 931 aaKnown RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 HGH1Q9BTY7 390 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 MRPL1Q9BYD6 325 aaKnown RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 DBNDD1Q9H9R9 158 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 TMEM248Q9NWD8 314 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 FBXL17Q9UF56 701 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 SEC63Q9UGP8 760 aaKnown RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 ACAD8Q9UKU7 415 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 PTRH2Q9Y3E5 179 aaKnown RBP6.07□□□□□ -1.44
SCFD1-208ENST00000553278 TRPV2Q9Y5S1 764 aa6.07□□□□□ -1.44
SCFD1-208ENST00000553278 ADGRF5Q8IZF2 1346 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 USP17L23D6RBM5 183 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 YY2O15391 372 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 NDUFS3O75489 264 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 CBX6O95503 412 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 TSPAN15O95858 294 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 SERPINC1P01008 464 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 HNRNPCP07910 306 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ABCB1P08183 1280 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ADH4P08319 380 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 NPSP0C0P6 89 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 NR2F6P10588 404 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 TMEM11P17152 192 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ENGP17813 658 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 CYP2C18P33260 490 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 PTPN9P43378 593 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 VPS41P49754 854 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 PPP2R5CQ13362 524 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 C15orf59Q2T9L4 293 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 HS1BP3Q53T59 392 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms