RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NELFBQ8WX92 580 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 RNF34Q969K3 372 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 ARRDC3Q96B67 414 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 TSG101Q99816 390 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SEMA4CQ9C0C4 833 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 TNKS2Q9H2K2 1166 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 FAM204AQ9H8W3 233 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 CPNE5Q9HCH3 593 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 VANGL2Q9ULK5 521 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 NFE2L3Q9Y4A8 694 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 ITIH6Q6UXX5 1313 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A0D9SEW6 157 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 EDDM13A0A1B0GTR0 161 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A1W2PNU3 283 aaPredicted RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 LRRC72A6NJI9 287 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 CAPN9O14815 690 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 RAD51BO15315 384 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC16A3O15427 465 aaKnown RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 IRAK2O43187 625 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 STX10O60499 249 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 RNASEH1O60930 286 aaKnown RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 RFPL3O75679 317 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ADCY5O95622 1261 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ERBB2P04626 1255 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 MYL1P05976 194 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 PAEPP09466 180 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF18P17022 549 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ABCG1P45844 678 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 NUCB2P80303 420 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 INSM1Q01101 510 aaPredicted RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 DLG2Q15700 870 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ALFQ53S48 1182 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 AGBL4Q5VU57 503 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 OTUD1Q5VV17 481 aaPredicted RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 NUGGCQ68CJ6 796 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 TTI2Q6NXR4 508 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 FBXL19Q6PCT2 694 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 FAM183BPQ6ZVS7 135 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 TFAP2DQ7Z6R9 452 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 UNC45BQ8IWX7 931 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ALDH16A1Q8IZ83 802 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 GALNT15Q8N3T1 639 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 OR13H1Q8NG92 308 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 OR7D4Q8NG98 312 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 OR6K2Q8NGY2 324 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 GOLGA1Q92805 767 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 SMARCE1Q969G3 411 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 ALG14Q96F25 216 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 RPRD1AQ96P16 312 aaPredicted RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 FCRL3Q96P31 734 aaPredicted RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 MED15Q96RN5 788 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 CPXM1Q96SM3 734 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 PSMB7Q99436 277 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 PRMT1Q99873 361 aaKnown RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 SRRTQ9BXP5 876 aaKnown RBP7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 CALN1Q9BXU9 219 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 GDF3Q9NR23 364 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 DDIT4Q9NX09 232 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 MPP6Q9NZW5 540 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A087WV48 116 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 A0A1W2PQU0 124 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 KCNU1A8MYU2 1149 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 C10orf142B7Z368 130 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 F5H5T6 163 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 KPNA3O00505 521 aaPredicted RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 RNGTTO60942 597 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 PAGE1O75459 146 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 GJB6O95452 261 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 GIMD1P0DJR0 217 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 SNRPBP14678 240 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ITIH2P19823 946 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 TBXAS1P24557 533 aaPredicted RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 DNA2P51530 1060 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 CCR5P51681 352 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 YWHAZP63104 245 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 CXADRP78310 365 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ZBTB16Q05516 673 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 PDCLQ13371 301 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 AUHQ13825 339 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 LY6DQ14210 128 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 FGL2Q14314 439 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 CAMK4Q16566 473 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 KIF26BQ2KJY2 2108 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ARHGAP40Q5TG30 622 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 SFMBT2Q5VUG0 894 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 FOXR1Q6PIV2 292 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 USP30Q70CQ3 517 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 C1orf131Q8NDD1 294 aaKnown RBP7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF606Q8WXB4 792 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 IRGQQ8WZA9 623 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 SERPINB11Q96P15 392 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 FEM1AQ9BSK4 669 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 DNAI2Q9GZS0 605 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 SAP130Q9H0E3 1048 aa7.02□□□□□ -1.29
PRPF40B-214ENST00000551320 PCED1AQ9H1Q7 454 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms