RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MUSKO15146 869 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 ZNF185O15231 689 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 CEP104O60308 925 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 SIN3BO75182 1162 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 TMCC1O94876 653 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 TJP3O95049 919 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 EPHX1P07099 455 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 TDGF1P13385 188 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 HOXB2P14652 356 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 CETN2P41208 172 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 RGRP47804 291 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 COPAP53621 1224 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 ST8SIA6P61647 398 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
RAB5C-206ENST00000550406 ACCSLQ4AC99 568 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 INO80DQ53TQ3 878 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-206ENST00000550406 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 SEL1L2Q5TEA6 688 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 C22orf39Q6P5X5 142 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 Q6ZVU0 165 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 ADAT2Q7Z6V5 191 aaKnown RBP13.28□□□□□ -0.28
RAB5C-206ENST00000550406 PGBD5Q8N414 524 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 MAML1Q92585 1016 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 P3H4Q92791 437 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 FATE1Q969F0 183 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 PBKQ96KB5 322 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 NSMCE3Q96MG7 304 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 IER2Q9BTL4 223 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 TNKS2Q9H2K2 1166 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 C10orf88Q9H8K7 445 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 SP110Q9HB58 689 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 LHX3Q9UBR4 397 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 UBA2Q9UBT2 640 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-206ENST00000550406 SUN2Q9UH99 717 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 ZDBF2Q9HCK1 2354 aa13.28□□□□□ -0.28
RAB5C-206ENST00000550406 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 TARSL2A2RTX5 802 aaKnown RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 MATN3O15232 486 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 PAPSS2O95340 614 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 C7P10643 843 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 PRLRP16471 622 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 MX2P20592 715 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 CXCL12P48061 93 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 CLCN6P51797 869 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 PDK1Q15118 436 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 PRKD1Q15139 912 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 E2F5Q15329 346 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 SDE2Q6IQ49 451 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 ZC3H18Q86VM9 953 aaKnown RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 STK40Q8N2I9 435 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 CHST14Q8NCH0 376 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 OR2A12Q8NGT7 310 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 CASKIN2Q8WXE0 1202 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 ISG20Q96AZ6 181 aaKnown RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 ZNF599Q96NL3 588 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 HHIPQ96QV1 700 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 NAPGQ99747 312 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 CEP44Q9C0F1 390 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 SLC6A17Q9H1V8 727 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 SMARCAL1Q9NZC9 954 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 TTC7AQ9ULT0 858 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-206ENST00000550406 PLXND1Q9Y4D7 1925 aa13.27□□□□□ -0.29
RAB5C-206ENST00000550406 KCNK1O00180 336 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 INSIG1O15503 277 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 GJB3O75712 270 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 FGGP02679 453 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 GABRG2P18507 467 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 NNMTP40261 264 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 ZNF33AQ06730 810 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 DMWDQ09019 674 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 XRCC4Q13426 336 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 HNRNPDQ14103 355 aaKnown RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 IHHQ14623 411 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 RFTN1Q14699 578 aaPredicted RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 LBRQ14739 615 aaKnown RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 CARD16Q5EG05 197 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 ATXN7L2Q5T6C5 722 aaPredicted RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 TSSK4Q6SA08 328 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 DPY19L3Q6ZPD9 716 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 C1orf210Q8IVY1 113 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 PCDH20Q8N6Y1 951 aaKnown RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 CNTD1Q8N815 330 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 CCNYQ8ND76 341 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 SLC35B2Q8TB61 432 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 CEP192Q8TEP8 1941 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 IL12RB2Q99665 862 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 TM6SF2Q9BZW4 377 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 MKRN2Q9H000 416 aaKnown RBP13.26□□□□□ -0.29
RAB5C-206ENST00000550406 USP29Q9HBJ7 922 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 SARDHQ9UL12 918 aa13.26□□□□□ -0.29
RAB5C-206ENST00000550406 FANCMQ8IYD8 2048 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms