RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ACTRT1Q8TDG2 376 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 LRRN4Q8WUT4 740 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 ISG20Q96AZ6 181 aaKnown RBP21.48■■□□□ 1.03
CACNB3-210ENST00000548874 CD248Q9HCU0 757 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 SAR1BQ9Y6B6 198 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 ATG2BQ96BY7 2078 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 HACD1B0YJ81 288 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 KIF2AO00139 706 aaPredicted RBP21.47■■□□□ 1.03
CACNB3-210ENST00000548874 ZNF185O15231 689 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 MATN3O15232 486 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 TMCC1O94876 653 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 HLA-EP13747 358 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 WASP42768 502 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 CYTH1Q15438 398 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 SDE2Q6IQ49 451 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 C22orf39Q6P5X5 142 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 SYT13Q7L8C5 426 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 ZNF366Q8N895 744 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 TMEM105Q8N8V8 129 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 SLC35B2Q8TB61 432 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 MAIP1Q8WWC4 291 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 MS4A14Q96JA4 679 aa21.47■■□□□ 1.03
CACNB3-210ENST00000548874 QKIQ96PU8 341 aaKnown RBP eCLIP21.47■■□□□ 1.03
CACNB3-210ENST00000548874 FCF1Q9Y324 198 aaKnown RBP21.47■■□□□ 1.03
CACNB3-210ENST00000548874 A0A1W2PQF6 199 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 HOXB2P14652 356 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 EIF3EP60228 445 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 SLC10A7Q0GE19 358 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 MTAPQ13126 283 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 CAMK2GQ13555 558 aaPredicted RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 HNRNPDQ14103 355 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 LBRQ14739 615 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 LONRF2Q1L5Z9 754 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 SLC45A4Q5BKX6 768 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 ADAT2Q7Z6V5 191 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 ZC3H18Q86VM9 953 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 TEX26Q8N6G2 289 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 PCDH20Q8N6Y1 951 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 TFB1MQ8WVM0 346 aaKnown RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 PTPRN2Q92932 1015 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 ZNF419Q96HQ0 510 aaPredicted RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 FAM118BQ9BPY3 351 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 FRMD8P1Q9BZ68 369 aaPredicted RBP21.46■■□□□ 1.03
CACNB3-210ENST00000548874 MTG2Q9H4K7 406 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 C2orf42Q9NWW7 574 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 LHX3Q9UBR4 397 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 SUN2Q9UH99 717 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 SLC8A2Q9UPR5 921 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 CKAP5Q14008 2032 aa21.46■■□□□ 1.03
CACNB3-210ENST00000548874 EDDM13A0A1B0GTR0 161 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 TARSL2A2RTX5 802 aaKnown RBP21.45■■□□□ 1.02
CACNB3-210ENST00000548874 PGRMC1O00264 195 aaKnown RBP21.45■■□□□ 1.02
CACNB3-210ENST00000548874 MCF2LO15068 1137 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 GPR37L1O60883 481 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 EPHX1P07099 455 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 RBP3P10745 1247 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 VAV1P15498 845 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 IFI35P80217 286 aaPredicted RBP21.45■■□□□ 1.02
CACNB3-210ENST00000548874 AP1B1Q10567 949 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 CRY1Q16526 586 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 ACCSLQ4AC99 568 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 C9orf64Q5T6V5 341 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 TMEM92Q6UXU6 159 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 B4GALNT4Q76KP1 1039 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 CREG2Q8IUH2 290 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 PLPP6Q8IY26 295 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 PSKH2Q96QS6 385 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 NAP1L3Q99457 506 aaPredicted RBP21.45■■□□□ 1.02
CACNB3-210ENST00000548874 PRSS16Q9NQE7 514 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 POLR3BQ9NW08 1133 aaPredicted RBP21.45■■□□□ 1.02
CACNB3-210ENST00000548874 SMARCAL1Q9NZC9 954 aa21.45■■□□□ 1.02
CACNB3-210ENST00000548874 FAM86C2PA6NEL3 165 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 H7C0C1 242 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 COL9A1P20849 921 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 ATP5OP48047 213 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 MARC1Q5VT66 337 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 KIAA1211LQ6NV74 962 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 Q6ZVU0 165 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 CDKL3Q8IVW4 592 aaPredicted RBP21.44■■□□□ 1.02
CACNB3-210ENST00000548874 NSMCE1Q8WV22 266 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 ATG4AQ8WYN0 398 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 NKD2Q969F2 451 aaPredicted RBP21.44■■□□□ 1.02
CACNB3-210ENST00000548874 IL12RB2Q99665 862 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 SEPT3Q9UH03 358 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 SHROOM3Q8TF72 1996 aa21.44■■□□□ 1.02
CACNB3-210ENST00000548874 BCLAF3A2AJT9 711 aaKnown RBP21.43■■□□□ 1.02
CACNB3-210ENST00000548874 PRR33A8MZF0 331 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 KCNK1O00180 336 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 MUSKO15146 869 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 LIASO43766 372 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 SIN3BO75182 1162 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 PAPSS2O95340 614 aaPredicted RBP21.43■■□□□ 1.02
CACNB3-210ENST00000548874 GSRP00390 522 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 CCNB1P14635 433 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 MMP13P45452 471 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 RENBPP51606 427 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 RHOAP61586 193 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 STARD3Q14849 445 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 CCNG2Q16589 344 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 DRICH1Q6PGQ1 229 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms