RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SNX24Q9Y343 169 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 ESYT3A0FGR9 886 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 ZBTB24O43167 697 aaPredicted RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 HLA-DQB2P05538 268 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 POLR2EP19388 210 aaKnown RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 IVDP26440 423 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 RPL21P46778 160 aaKnown RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 DRG2P55039 364 aaKnown RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 ZNF235Q14590 738 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 ELF2Q15723 593 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 PREPLQ4J6C6 727 aaPredicted RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 INO80DQ53TQ3 878 aaPredicted RBP29.29■■■□□ 2.28
BRF1-213ENST00000548421 MBLAC2Q68D91 279 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 CASKIN2Q8WXE0 1202 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 CHFRQ96EP1 664 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 GDF3Q9NR23 364 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 HAUS2Q9NVX0 235 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 PRKAG3Q9UGI9 489 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 SEPT3Q9UH03 358 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 ACTL7AQ9Y615 435 aa29.29■■■□□ 2.28
BRF1-213ENST00000548421 CD160O95971 181 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 KDSRQ06136 332 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 SLC20A2Q08357 652 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 TMEM215Q68D42 235 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 METTL3Q86U44 580 aaKnown RBP29.28■■■□□ 2.28
BRF1-213ENST00000548421 ADHFE1Q8IWW8 467 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 TTC17Q96AE7 1141 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 CINPQ9BW66 212 aaPredicted RBP29.28■■■□□ 2.28
BRF1-213ENST00000548421 GBA3Q9H227 469 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 NT5MQ9NPB1 228 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 FAM114A2Q9NRY5 505 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 RSPH14Q9UHP6 348 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 SLC25A13Q9UJS0 675 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 ATP8A1Q9Y2Q0 1164 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 TTLL3Q9Y4R7 772 aa29.28■■■□□ 2.28
BRF1-213ENST00000548421 CD68P34810 354 aaPredicted RBP29.27■■■□□ 2.28
BRF1-213ENST00000548421 SERPINH1P50454 418 aaKnown RBP29.27■■■□□ 2.28
BRF1-213ENST00000548421 ECT2LQ008S8 904 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 PARP6Q2NL67 630 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 PHTF2Q8N3S3 785 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 TERB1Q8NA31 727 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 PNKPQ96T60 521 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 RAB6BQ9NRW1 208 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 WHRNQ9P202 907 aa29.27■■■□□ 2.28
BRF1-213ENST00000548421 DNALI1O14645 258 aaPredicted RBP29.26■■■□□ 2.27
BRF1-213ENST00000548421 TMCC1O94876 653 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 SEC31AO94979 1220 aaKnown RBP29.26■■■□□ 2.27
BRF1-213ENST00000548421 METTL18O95568 372 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 NFKB1P19838 968 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 FDFT1P37268 417 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 CTSOP43234 321 aaPredicted RBP29.26■■■□□ 2.27
BRF1-213ENST00000548421 BASP1P80723 227 aaKnown RBP29.26■■■□□ 2.27
BRF1-213ENST00000548421 TAB3Q8N5C8 712 aaPredicted RBP29.26■■■□□ 2.27
BRF1-213ENST00000548421 BBOF1Q8ND07 529 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 PSKH2Q96QS6 385 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 GLOD4Q9HC38 313 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 HS3ST2Q9Y278 367 aa29.26■■■□□ 2.27
BRF1-213ENST00000548421 NDC80O14777 642 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 MT-CO1P00395 513 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 PSMB4P28070 264 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 SOX9P48436 509 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 PFKPQ01813 784 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 MESP2Q0VG99 397 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 CALCOCO2Q13137 446 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 TDGQ13569 410 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 CUL1Q13616 776 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 CYTH1Q15438 398 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 TRADDQ15628 312 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 IZUMO3Q5VZ72 239 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 NAIF1Q69YI7 327 aaPredicted RBP29.25■■■□□ 2.27
BRF1-213ENST00000548421 PCGF5Q86SE9 256 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 CIPCQ9C0C6 399 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 ETNK1Q9HBU6 452 aa29.25■■■□□ 2.27
BRF1-213ENST00000548421 TPX2Q9ULW0 747 aaKnown RBP29.25■■■□□ 2.27
BRF1-213ENST00000548421 ASLP04424 464 aa29.24■■■□□ 2.27
BRF1-213ENST00000548421 ATP5BP06576 529 aaKnown RBP29.24■■■□□ 2.27
BRF1-213ENST00000548421 ITIH2P19823 946 aa29.24■■■□□ 2.27
BRF1-213ENST00000548421 HSPA9P38646 679 aaKnown RBP29.24■■■□□ 2.27
BRF1-213ENST00000548421 EIF4HQ15056 248 aaKnown RBP29.24■■■□□ 2.27
BRF1-213ENST00000548421 FAXCQ5TGI0 409 aa29.24■■■□□ 2.27
BRF1-213ENST00000548421 ATP11CQ8NB49 1132 aa29.24■■■□□ 2.27
BRF1-213ENST00000548421 POLR1EQ9GZS1 481 aaKnown RBP29.24■■■□□ 2.27
BRF1-213ENST00000548421 GRHL1Q9NZI5 618 aa29.24■■■□□ 2.27
BRF1-213ENST00000548421 TUBBP07437 444 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 MCM3P25205 808 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 TERF1P54274 439 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 ZP2Q05996 745 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 ITKQ08881 620 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 WDR93Q6P2C0 686 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 PGBD5Q8N414 524 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 TSEN2Q8NCE0 465 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 IFT81Q8WYA0 676 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 RPL10LQ96L21 214 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 PPP1R2P1Q96PQ5 205 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 FCRL5Q96RD9 977 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 MGME1Q9BQP7 344 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 C8orf33Q9H7E9 229 aaPredicted RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 ELOVL2Q9NXB9 296 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 FCF1Q9Y324 198 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 PRRT4C9JH25 899 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms