RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 CDK16Q00536 496 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 SEMA5AQ13591 1074 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.43
LETMD1-215ENST00000548390 BRD3Q15059 726 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 E2F5Q15329 346 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 MAP9Q49MG5 647 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
LETMD1-215ENST00000548390 CEP128Q6ZU80 1094 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 NUDT18Q6ZVK8 323 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 PRUNE1Q86TP1 453 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 SUGP1Q8IWZ8 645 aaKnown RBP17.71■□□□□ 0.43
LETMD1-215ENST00000548390 APCDD1Q8J025 514 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 CNTD1Q8N815 330 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 CSGALNACT1Q8TDX6 532 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 IFT81Q8WYA0 676 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 DNASE1L2Q92874 299 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 TTC17Q96AE7 1141 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 AGAP3Q96P47 875 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 PSKH2Q96QS6 385 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 FCRL5Q96RD9 977 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 CINPQ9BW66 212 aaPredicted RBP17.71■□□□□ 0.43
LETMD1-215ENST00000548390 TSPYL1Q9H0U9 437 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 EPC1Q9H2F5 836 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 GLOD4Q9HC38 313 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
LETMD1-215ENST00000548390 GRHL1Q9NZI5 618 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
LETMD1-215ENST00000548390 SLC25A13Q9UJS0 675 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 ANAPC5Q9UJX4 755 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 ATP8A1Q9Y2Q0 1164 aa17.71■□□□□ 0.43
LETMD1-215ENST00000548390 KIF26AQ9ULI4 1882 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 E7EVH7 732 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 ERLIN1O75477 346 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 ANXA9O76027 345 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 POLR2EP19388 210 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 TPSB2P20231 275 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 NRLP54845 237 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 VSNL1P62760 191 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 BASP1P80723 227 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 SLC10A7Q0GE19 358 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 NAA30Q147X3 362 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 EIF4HQ15056 248 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 TPSAB1Q15661 275 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 GAB4Q2WGN9 574 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 FUT11Q495W5 492 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 RALGPS1Q5JS13 557 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 RNASEH2BQ5TBB1 312 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 HIBCHQ6NVY1 386 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 NAT16Q8N8M0 369 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 MAFAQ8NHW3 353 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 USP33Q8TEY7 942 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 ART4Q93070 314 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 RPP25Q9BUL9 199 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 POLR1EQ9GZS1 481 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 SLC25A51Q9H1U9 297 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 ETNK1Q9HBU6 452 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 ARGLU1Q9NWB6 273 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 HS3ST2Q9Y278 367 aa17.7■□□□□ 0.42
LETMD1-215ENST00000548390 AAR2Q9Y312 384 aaKnown RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 FARP1Q9Y4F1 1045 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-215ENST00000548390 CCDC151A5D8V7 595 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 SNAP91O60641 907 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 METTL18O95568 372 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 HLA-DQB2P05538 268 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ATP5BP06576 529 aaKnown RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 GLDCP23378 1020 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 SP100P23497 879 aaPredicted RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 GJA4P35212 333 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 SERPINH1P50454 418 aaKnown RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ITGA8P53708 1063 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 PLTPP55058 493 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 SARNPP82979 210 aaKnown RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 PFKPQ01813 784 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 SLC14A2Q15849 920 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 AAK1Q2M2I8 961 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 MBLAC2Q68D91 279 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ALG1LQ6GMV1 187 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ASTLQ6HA08 431 aaPredicted RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ADIPOR2Q86V24 386 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 KLHDC8BQ8IXV7 354 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ST13P5Q8NFI4 369 aaPredicted RBP17.69■□□□□ 0.42
LETMD1-215ENST00000548390 CPT1BQ92523 772 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 MGME1Q9BQP7 344 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 CEP41Q9BYV8 373 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 CEP44Q9C0F1 390 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 NT5MQ9NPB1 228 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 VPS45Q9NRW7 570 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 ZDHHC18Q9NUE0 388 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 GTSE1Q9NYZ3 720 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 LIMD1Q9UGP4 676 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 SZT2Q5T011 3432 aa17.69■□□□□ 0.42
LETMD1-215ENST00000548390 CHD5Q8TDI0 1954 aa17.68■□□□□ 0.42
LETMD1-215ENST00000548390 OTOL1A6NHN0 477 aaPredicted RBP17.68■□□□□ 0.42
LETMD1-215ENST00000548390 TMCC1O94876 653 aa17.68■□□□□ 0.42
LETMD1-215ENST00000548390 SRPRAP08240 638 aaKnown RBP17.68■□□□□ 0.42
LETMD1-215ENST00000548390 NFKB1P19838 968 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 265.3 ms