RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 DPY19L3Q6ZPD9 716 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 ERN2Q76MJ5 926 aaKnown RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 SLFN11Q7Z7L1 901 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 PHLDB2Q86SQ0 1253 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 ZSCAN30Q86W11 494 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 HORMAD1Q86X24 394 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 PLPP6Q8IY26 295 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 C3orf20Q8ND61 904 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 FAM174AQ8TBP5 190 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 CENPIQ92674 756 aaPredicted RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 NTAN1Q96AB6 310 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 ISG20Q96AZ6 181 aaKnown RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 TBC1D31Q96DN5 1066 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 KLHDC7BQ96G42 594 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 LRIG1Q96JA1 1093 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 AGPAT1Q99943 283 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 HDAC8Q9BY41 377 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 MAGEH1Q9H213 219 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 TNKS2Q9H2K2 1166 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 ARHGAP20Q9P2F6 1191 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 ZNF212Q9UDV6 495 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 IL36AQ9UHA7 158 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 MYO6Q9UM54 1294 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 BTBD3Q9Y2F9 522 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 EPG5Q9HCE0 2579 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 A0A1W2PQU0 124 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 ZSCAN5CA6NGD5 496 aaPredicted RBP9.55□□□□□ -0.88
YBX3-218ENST00000546298 GOLGA8CPA6NN73 597 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 WNT9AO14904 365 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 SLC31A1O15431 190 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 RAMP2O60895 175 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 LEFTY1O75610 366 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 LRIG2O94898 1065 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 DKK1O94907 266 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 PCDH8O95206 1070 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 LDOC1O95751 146 aaPredicted RBP9.55□□□□□ -0.88
YBX3-218ENST00000546298 CTSLP07711 333 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 C1SP09871 688 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 TNFAIP3P21580 790 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 EPHA8P29322 1005 aaPredicted RBP9.55□□□□□ -0.88
YBX3-218ENST00000546298 AKT2P31751 481 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 L1CAMP32004 1257 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 NEK3P51956 506 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 ZNF143P52747 638 aaPredicted RBP9.55□□□□□ -0.88
YBX3-218ENST00000546298 AIF1P55008 147 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 IL9RQ01113 521 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 TYRO3Q06418 890 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 SCAPQ12770 1279 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 PTP4A2Q12974 167 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 NCAPHQ15003 741 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 POLD3Q15054 466 aaPredicted RBP9.55□□□□□ -0.88
YBX3-218ENST00000546298 FILIP1LQ4L180 1135 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 EFHC2Q5JST6 749 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 PIP5KL1Q5T9C9 394 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 MANEALQ5VSG8 457 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 ACAD10Q6JQN1 1059 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 DNAJC24Q6P3W2 148 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 FBXL19Q6PCT2 694 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 DCUN1D2Q6PH85 259 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 WDR59Q6PJI9 974 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 GATAD2AQ86YP4 633 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 RYBPQ8N488 228 aaPredicted RBP9.55□□□□□ -0.88
YBX3-218ENST00000546298 CHST14Q8NCH0 376 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 JOSD2Q8TAC2 188 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 GRIN3AQ8TCU5 1115 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 SAP25Q8TEE9 199 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 FAM172AQ8WUF8 416 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 ARRDC3Q96B67 414 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 FEM1CQ96JP0 617 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 TMEM248Q9NWD8 314 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 DONSONQ9NYP3 566 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 PCDHGA1Q9Y5H4 931 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 DCHS1Q96JQ0 3298 aa9.55□□□□□ -0.88
YBX3-218ENST00000546298 DMDP11532 3685 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 ENC1O14682 589 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 GJB6O95452 261 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 POP4O95707 220 aaKnown RBP9.54□□□□□ -0.88
YBX3-218ENST00000546298 HNRNPA2B1P22626 353 aaKnown RBP9.54□□□□□ -0.88
YBX3-218ENST00000546298 GLDCP23378 1020 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 ITGB7P26010 798 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 EPHB2P29323 1055 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 CCNHP51946 323 aaPredicted RBP9.54□□□□□ -0.88
YBX3-218ENST00000546298 HDAC4P56524 1084 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 TAS2R38P59533 333 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 SNRPD1P62314 119 aaKnown RBP9.54□□□□□ -0.88
YBX3-218ENST00000546298 RPS21P63220 83 aaKnown RBP9.54□□□□□ -0.88
YBX3-218ENST00000546298 ARF5P84085 180 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 RAD51Q06609 339 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 SHBQ15464 509 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 HS1BP3Q53T59 392 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 CCDC157Q569K6 752 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 ARTNQ5T4W7 220 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 KIAA1161Q6NSJ0 714 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 SCYL2Q6P3W7 929 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 MON1BQ7L1V2 547 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 NLRP14Q86W24 1093 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 TMPRSS12Q86WS5 348 aa9.54□□□□□ -0.88
YBX3-218ENST00000546298 ZNF354CQ86Y25 554 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms