RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CRB3Q9BUF7 120 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 CADM1Q9BY67 442 aaKnown RBP5.05□□□□□ -1.6
SNHG1-224ENST00000545688 PCGF6Q9BYE7 350 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 PLSCR4Q9NRQ2 329 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 OSGIN2Q9Y236 505 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 HMGXB3Q12766 1538 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 FCGR1AP12314 374 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 CYP4B1P13584 511 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 ACP5P13686 325 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 CHN1P15882 459 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 ZNF12P17014 697 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 MT3P25713 68 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 COMPP49747 757 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-224ENST00000545688 CLCNKBP51801 687 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 CDH12P55289 794 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 KIF5AQ12840 1032 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 ZNF628Q5EBL2 1059 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 C9orf57Q5W0N0 161 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNHG1-224ENST00000545688 ARMC9Q7Z3E5 817 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 GALNT7Q86SF2 657 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 SERPINA11Q86U17 422 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 FJX1Q86VR8 437 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 WDR5BQ86VZ2 330 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 STT3BQ8TCJ2 826 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 SLITRK1Q96PX8 696 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 TRAPPC9Q96Q05 1148 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 TXLNGQ9NUQ3 528 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 DACT1Q9NYF0 836 aa5.04□□□□□ -1.6
SNHG1-224ENST00000545688 ABHD14A-ACY1A0A1B0GW23 586 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 C17orf102A2RUQ5 167 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 DDTLA6NHG4 134 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-224ENST00000545688 BTBD18B2RXH4 712 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 KRT86O43790 486 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 PLIN1O60240 522 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 SOX30O94993 753 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 ZBTB11O95625 1053 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-224ENST00000545688 AMTP48728 403 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 NUDT6P53370 316 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 ICA1Q05084 483 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 TRAF3Q13114 568 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 KRT81Q14533 505 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 PLCB4Q15147 1175 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 SYCP2LQ5T4T6 812 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 ATG9BQ674R7 924 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 RINLQ6ZS11 566 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 CREB3L2Q70SY1 520 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 C16orf82Q7Z2V1 217 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 CUZD1Q86UP6 607 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 PALB2Q86YC2 1186 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 BRSK2Q8IWQ3 736 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 ZDHHC23Q8IYP9 409 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 MIGA1Q8NAN2 632 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 NEXN-AS1Q8NBZ9 246 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 GFM1Q96RP9 751 aaKnown RBP5.03□□□□□ -1.6
SNHG1-224ENST00000545688 IL36RNQ9UBH0 155 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 SEL1LQ9UBV2 794 aa5.03□□□□□ -1.6
SNHG1-224ENST00000545688 SRPRBQ9Y5M8 271 aaKnown RBP5.03□□□□□ -1.6
SNHG1-224ENST00000545688 A0A1B0GUV1 79 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 SMTNL1A8MU46 457 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 C17orf100A8MU93 164 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 H0Y3Z8 333 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 RNMTO43148 476 aaKnown RBP5.02□□□□□ -1.61
SNHG1-224ENST00000545688 ASAP2O43150 1006 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 CCNT1O60563 726 aaKnown RBP5.02□□□□□ -1.61
SNHG1-224ENST00000545688 ENO3P13929 434 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-224ENST00000545688 NAGAP17050 411 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 RFC1P35251 1148 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-224ENST00000545688 RPS6KA3P51812 740 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 SEC61A1P61619 476 aaKnown RBP5.02□□□□□ -1.61
SNHG1-224ENST00000545688 TMEM268Q5VZI3 342 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 AADACL2Q6P093 401 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 SYT13Q7L8C5 426 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 RASGRP2Q7LDG7 609 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 SCAIQ8N9R8 606 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 TMEM163Q8TC26 289 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 TMED6Q8WW62 240 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 DNASE2BQ8WZ79 361 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 TMLHEQ9NVH6 421 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 THAP1Q9NVV9 213 aa5.02□□□□□ -1.61
SNHG1-224ENST00000545688 CSTBP04080 98 aaKnown RBP5.01□□□□□ -1.61
SNHG1-224ENST00000545688 ARSAP15289 507 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 HTR3AP46098 478 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 ERVFC1-1P60608 527 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 TRAF2Q12933 501 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 COASYQ13057 564 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 HLFQ16534 295 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 TBC1D9BQ66K14 1250 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 TANGO2Q6ICL3 276 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 MON1BQ7L1V2 547 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 OTUD7AQ8TE49 926 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-224ENST00000545688 PPP1R10Q96QC0 940 aaKnown RBP5.01□□□□□ -1.61
SNHG1-224ENST00000545688 TEFMQ96QE5 360 aaKnown RBP5.01□□□□□ -1.61
SNHG1-224ENST00000545688 DDX23Q9BUQ8 820 aaKnown RBP5.01□□□□□ -1.61
SNHG1-224ENST00000545688 HERC2P3Q9BVR0 1158 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 LHPPQ9H008 270 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 ZNF556Q9HAH1 456 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 PLEKHA2Q9HB19 425 aa5.01□□□□□ -1.61
SNHG1-224ENST00000545688 SMARCA2P51531 1590 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms