RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 GEMIN4P57678 1058 aaKnown RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 CCDC15Q0P6D6 951 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 CNTN1Q12860 1018 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 HNRNPDQ14103 355 aaKnown RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 HLA-BQ31612 363 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 AGBL4Q5VU57 503 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3GQ6DHY5 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3CQ6IPX1 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 DNAAF5Q86Y56 855 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3Q8IZP1 549 aaPredicted RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 RTL3Q8N8U3 475 aaKnown RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 FNIP1Q8TF40 1166 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 EPAS1Q99814 870 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TNKS2Q9H2K2 1166 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 EBF2Q9HAK2 575 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 CNOT8Q9UFF9 292 aaKnown RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 IL36AQ9UHA7 158 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 HPCAL4Q9UM19 191 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 ANKRD6Q9Y2G4 727 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 BZW2Q9Y6E2 419 aaKnown RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 SCINQ9Y6U3 715 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 SPTBN2O15020 2390 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TMEM191CA6NGB0 347 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 ZNF821O75541 412 aaPredicted RBP17.27■□□□□ 0.36
HOXD8-204ENST00000544999 CD160O95971 181 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 MYBL1P10243 752 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 EPHB2P29323 1055 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 HTR7P34969 479 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 PPP2CBP62714 309 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 PPP2CAP67775 309 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 ZBED6P86452 979 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 POLD3Q15054 466 aaPredicted RBP17.27■□□□□ 0.36
HOXD8-204ENST00000544999 KIF19Q2TAC6 998 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 POM121L1PQ3SYA9 428 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 TDRD12Q587J7 1177 aaKnown RBP17.27■□□□□ 0.36
HOXD8-204ENST00000544999 HGSNATQ68CP4 663 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 DPY19L3Q6ZPD9 716 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 ADAT2Q7Z6V5 191 aaKnown RBP17.27■□□□□ 0.36
HOXD8-204ENST00000544999 CHST14Q8NCH0 376 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 ISG20Q96AZ6 181 aaKnown RBP17.27■□□□□ 0.36
HOXD8-204ENST00000544999 ZNF653Q96CK0 615 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 SLC6A18Q96N87 628 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 ISCUQ9H1K1 167 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 CATSPERBQ9H7T0 1116 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 IL21RQ9HBE5 538 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 DYRK4Q9NR20 520 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 IFNKQ9P0W0 207 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 CAPN11Q9UMQ6 739 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 FCF1Q9Y324 198 aaKnown RBP17.27■□□□□ 0.36
HOXD8-204ENST00000544999 SNX11Q9Y5W9 270 aa17.27■□□□□ 0.36
HOXD8-204ENST00000544999 PCNX2A6NKB5 2137 aa17.27■□□□□ 0.35
HOXD8-204ENST00000544999 KPNA3O00505 521 aaPredicted RBP17.26■□□□□ 0.35
HOXD8-204ENST00000544999 VILLO15195 856 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 LATO43561 262 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 CREB3O43889 395 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 NUDT1P36639 197 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 CARD16Q5EG05 197 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 LAYNQ6UX15 382 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 PRPF39Q86UA1 669 aaKnown RBP17.26■□□□□ 0.35
HOXD8-204ENST00000544999 VPS36Q86VN1 386 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 TRIM69Q86WT6 500 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 PLPP6Q8IY26 295 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 ARRDC3Q96B67 414 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 SKA1Q96BD8 255 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 PPP1R16AQ96I34 528 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 HEPHQ9BQS7 1158 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 PREBQ9HCU5 417 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 MRPL47Q9HD33 250 aaKnown RBP17.26■□□□□ 0.35
HOXD8-204ENST00000544999 TM7SF3Q9NS93 570 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 AP4E1Q9UPM8 1137 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 FNDC3AQ9Y2H6 1198 aaKnown RBP17.26■□□□□ 0.35
HOXD8-204ENST00000544999 PCDHGB2Q9Y5G2 931 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 ACTL7AQ9Y615 435 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 WASF2Q9Y6W5 498 aa17.26■□□□□ 0.35
HOXD8-204ENST00000544999 TMEM131Q92545 1883 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 ZSCAN5CA6NGD5 496 aaPredicted RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 FGF10O15520 208 aaPredicted RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 KDELR3O43731 214 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 SH3BP5O60239 455 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 LEFTY1O75610 366 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 RNF8O76064 485 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 SERPING1P05155 500 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 TPM3P06753 285 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 CTSKP43235 329 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 C21orf59P57076 290 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 YBEYP58557 167 aaPredicted RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 SHC2P98077 582 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 ARSIQ5FYB1 569 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 PIP5KL1Q5T9C9 394 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 NAXDQ8IW45 347 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 SERAC1Q96JX3 654 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 NCAPGQ9BPX3 1015 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 HDAC8Q9BY41 377 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
HOXD8-204ENST00000544999 AASDHPPTQ9NRN7 309 aa17.25■□□□□ 0.35
HOXD8-204ENST00000544999 DONSONQ9NYP3 566 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms