RNA–Protein interactions for RNA: ENST00000543933.5

C1RL-208, Transcript of complement C1r subcomponent like, human

TSL 5

Gene C1RL, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1RL-208	ENST00000543933	APC2	O95996	2303 aa		11.63	□□□□□ -0.55
C1RL-208	ENST00000543933	LRRK1	Q38SD2	2015 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933		A0A1W2PQU0	124 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	ILVBL	A1L0T0	632 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	C2CD4B	A6NLJ0	364 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	PES1	O00541	588 aa	Known RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	TRIM38	O00635	465 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	ENC1	O14682	589 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	RAD51B	O15315	384 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	SLC31A1	O15431	190 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	SLC7A4	O43246	635 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	SPINT1	O43278	529 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	SDC3	O75056	442 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	LEFTY1	O75610	366 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	LSM8	O95777	96 aa	Known RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	RDX	P35241	583 aa	Known RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	RFC1	P35251	1148 aa	Predicted RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	ADRA1B	P35368	520 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	SOX5	P35711	763 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	ACADVL	P49748	655 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	COPB1	P53618	953 aa	Known RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	OXCT1	P55809	520 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	HDAC4	P56524	1084 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	CLDN2	P57739	230 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	CYP4F3	Q08477	520 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	CDO1	Q16878	200 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	LRSAM1	Q6UWE0	723 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	LEKR1	Q6ZMV7	388 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	GCNT7	Q6ZNI0	430 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	ARC	Q7LC44	396 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	PRPF39	Q86UA1	669 aa	Known RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	DNAAF5	Q86Y56	855 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	DRC7	Q8IY82	874 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	SLC22A18AS	Q8N1D0	253 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	PYROXD2	Q8N2H3	581 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	TMIE	Q8NEW7	156 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	BAP1	Q92560	729 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	CENPI	Q92674	756 aa	Predicted RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	CNDP2	Q96KP4	475 aa	Known RBP	11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	BMF	Q96LC9	184 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	PDCL3	Q9H2J4	239 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	KDM4C	Q9H3R0	1056 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	GGT7	Q9UJ14	662 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	RAX	Q9Y2V3	346 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	KNTC1	P50748	2209 aa		11.62	□□□□□ -0.55
C1RL-208	ENST00000543933	CELSR3	Q9NYQ7	3312 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	ITPR1	Q14643	2758 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	KPNA3	O00505	521 aa	Predicted RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	LDOC1	O95751	146 aa	Predicted RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	F9	P00740	461 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	ITGAV	P06756	1048 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	MYF5	P13349	255 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	ITIH2	P19823	946 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	OR1E1	P30953	314 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	KRT83	P78385	493 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	GNA12	Q03113	381 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	C1QBP	Q07021	282 aa	Known RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	SYCP1	Q15431	976 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	TMEM259	Q4ZIN3	620 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	FAM46C	Q5VWP2	391 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	WDR59	Q6PJI9	974 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	OR13H1	Q8NG92	308 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	GRIN3A	Q8TCU5	1115 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	SPON2	Q9BUD6	331 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	ZYG11B	Q9C0D3	744 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	CCDC86	Q9H6F5	360 aa	Known RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	ERVMER34-1	Q9H9K5	563 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	GDF3	Q9NR23	364 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	FTSJ1	Q9UET6	329 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	LHX6	Q9UPM6	363 aa		11.61	□□□□□ -0.55
C1RL-208	ENST00000543933	FAM208B	Q5VWN6	2430 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	LAMA5	O15230	3695 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	URB1	O60287	2271 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	LY6G6E	A0A0G2JKS1	128 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	POM121B	A6NF01	834 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	C1QTNF3-AMACR	E9PGA6	284 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	CASC3	O15234	703 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	DFNA5	O60443	496 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	LRIG2	O94898	1065 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	ABL2	P42684	1182 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	SERPINH1	P50454	418 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	SNX16	P57768	344 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	OGDH	Q02218	1023 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	NRG1	Q02297	640 aa	Predicted RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	SFSWAP	Q12872	951 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	CLEC16A	Q2KHT3	1053 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	PROX2	Q3B8N5	592 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	ZNF542P	Q5EBM4	170 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	FBXL19	Q6PCT2	694 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	NYAP1	Q6ZVC0	841 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	ERN2	Q76MJ5	926 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	PARS2	Q7L3T8	475 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	HORMAD1	Q86X24	394 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	OR6K2	Q8NGY2	324 aa		11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	ARHGEF2	Q92974	986 aa	Known RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	KLF6	Q99612	283 aa	Predicted RBP	11.6	□□□□□ -0.55
C1RL-208	ENST00000543933	SYT11	Q9BT88	431 aa		11.6	□□□□□ -0.55

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