RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 PAEPP09466 180 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZC3H3Q8IXZ2 948 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 LPPQ93052 612 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 GPR20Q99678 358 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CPNE1Q99829 537 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 UBXN6Q9BZV1 441 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 ACTR8Q9H981 624 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 CHRAC1Q9NRG0 131 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC8A2Q9UPR5 921 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 LY75O60449 1722 aa13.12□□□□□ -0.31
TUBGCP2-210ENST00000543663 BTN3A1O00481 513 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 TRDMT1O14717 391 aaKnown RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 CHADO15335 359 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 HS6ST1O60243 411 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 VNN1O95497 513 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 ABHD2P08910 425 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PEX2P28328 305 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 HARS2P49590 506 aaKnown RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 CHN2P52757 468 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MPP2Q14168 576 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 KRT72Q14CN4 511 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MTX3Q5HYI7 312 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 TTC23LQ6PF05 361 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PACS1Q6VY07 963 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 GBA2Q9HCG7 927 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MYPNQ86TC9 1320 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 CITO14578 2027 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 FFAR3O14843 346 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 GPR42O15529 346 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 TBX10O75333 385 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 VPS26AO75436 327 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MAFO75444 373 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 NTRK1P04629 796 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 CETPP11597 493 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 TFEBP19484 476 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 OR1E1P30953 314 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 NNMTP40261 264 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 GALK1P51570 392 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PLCL1Q15111 1095 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 C1orf220Q5T0J3 134 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 FBXO39Q8N4B4 442 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 KLHL5Q96PQ7 755 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 BPGMP07738 259 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 TPBGLP0DKB5 382 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 DNAJB2P25686 324 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 HSPA13P48723 471 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 CXCR3P49682 368 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 BLVRAP53004 296 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PSME3P61289 254 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 LRRC38Q5VT99 294 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 ZNF317Q96PQ6 595 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 MTG1Q9BT17 334 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 PLLPQ9Y342 182 aa13.11□□□□□ -0.31
TUBGCP2-210ENST00000543663 C2orf81A6NN90 581 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 HDAC3O15379 428 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 TIPRLO75663 272 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 BCL10O95999 233 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 PBLDP30039 288 aaPredicted RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 RFX3P48380 749 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 C6orf52Q5T4I8 152 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 DHRSXQ8N5I4 330 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 SENP8Q96LD8 212 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 U3KQV3 271 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 LDLRP01130 860 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC7A2P52569 658 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 RNASEH2BQ5TBB1 312 aaKnown RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 OVOS1Q6IE37 1185 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 GK5Q6ZS86 529 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 PSTKQ8IV42 348 aaKnown RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 TSPAN14Q8NG11 270 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 SLC44A1Q8WWI5 657 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 GFM2Q969S9 779 aaKnown RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 POLR1BQ9H9Y6 1135 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 C5orf58C9J3I9 102 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 PRIM2P49643 509 aa13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
TUBGCP2-210ENST00000543663 CDH18Q13634 790 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms