RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 LONRF2Q1L5Z9 754 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 INO80DQ53TQ3 878 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 C9orf64Q5T6V5 341 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 DRICH1Q6PGQ1 229 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ZNF572Q7Z3I7 529 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ZC3H18Q86VM9 953 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ATPAF2Q8N5M1 289 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ALLCQ8N6M5 410 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ZNF366Q8N895 744 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 C12orf50Q8NA57 414 aaPredicted RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 P3H4Q92791 437 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 PTPRN2Q92932 1015 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 SHDQ96IW2 340 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 CAPZA3Q96KX2 299 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 ZNF599Q96NL3 588 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 GABRG3Q99928 467 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 GORASP1Q9BQQ3 440 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 AP1M1Q9BXS5 423 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 LHX3Q9UBR4 397 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 NEU2Q9Y3R4 380 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 STON1Q9Y6Q2 735 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 LAMA1P25391 3075 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 CACNA1IQ9P0X4 2223 aa10.87□□□□□ -0.67
NPIPB3-210ENST00000542817 TTC24A2A3L6 582 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 BCLAF3A2AJT9 711 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 ZSCAN5CA6NGD5 496 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 HACD1B0YJ81 288 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CHURC1-FNTBB4DL54 471 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 KCNK1O00180 336 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 NCAM2O15394 837 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 TUBB4AP04350 444 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 DCNP07585 359 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 RBP3P10745 1247 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 ALADP13716 330 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 PTPN3P26045 913 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CD68P34810 354 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 TIE1P35590 1138 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 RPS9P46781 194 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 KCNJ1P48048 391 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 EIF3EP60228 445 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 MRPS21P82921 87 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 SLC20A2Q08357 652 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 HNRNPDQ14103 355 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 DLG2Q15700 870 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CCNG2Q16589 344 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 HNRNPA1L2Q32P51 320 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 FBXO43Q4G163 708 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 PREPLQ4J6C6 727 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 SLC45A4Q5BKX6 768 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 ALG1LQ6GMV1 187 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 RETSATQ6NUM9 610 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CCDC117Q8IWD4 279 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CCDC13Q8IYE1 715 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 SYNPOQ8N3V7 929 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 ZNF513Q8N8E2 541 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 GLIS1Q8NBF1 620 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 TXNDC5Q8NBS9 432 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 TSEN2Q8NCE0 465 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 OR2A12Q8NGT7 310 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 RPLP0P6Q8NHW5 317 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 TFB1MQ8WVM0 346 aaKnown RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 ANKRD7Q92527 254 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 RTP4Q96DX8 246 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 NELL2Q99435 816 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CEP41Q9BYV8 373 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 BRD8Q9H0E9 1235 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CHRDQ9H2X0 955 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 UBA2Q9UBT2 640 aaPredicted RBP10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 MRFAP1Q9Y605 127 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 CKAP5Q14008 2032 aa10.86□□□□□ -0.67
NPIPB3-210ENST00000542817 KIF2AO00139 706 aaPredicted RBP10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 TNFRSF10AO00220 468 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 INSIG1O15503 277 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 SIN3BO75182 1162 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 KLF8O95600 359 aaPredicted RBP10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 JCHAINP01591 159 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 HLA-DQB2P05538 268 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 ATP5BP06576 529 aaKnown RBP10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 CTSLP07711 333 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 MMP2P08253 660 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 CCNB1P14635 433 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 AOC1P19801 751 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 CETN2P41208 172 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 WASP42768 502 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 COPAP53621 1224 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 NIPAL4Q0D2K0 466 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 AP1B1Q10567 949 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 SNX1Q13596 522 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 LBRQ14739 615 aaKnown RBP10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 TMCO4Q5TGY1 634 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 C22orf39Q6P5X5 142 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 Q6ZVU0 165 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 BZW1Q7L1Q6 419 aaKnown RBP10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 BMP8AQ7Z5Y6 402 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 PRUNE1Q86TP1 453 aa10.85□□□□□ -0.67
NPIPB3-210ENST00000542817 ATP11CQ8NB49 1132 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms