RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SLC7A4O43246 635 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 CFIP05156 583 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 TPM1P09493 284 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 GNSP15586 552 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 TCF4P15884 667 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 IL1R2P27930 398 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 CHRNA3P32297 505 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 HCAR3P49019 387 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 ZNF135P52742 658 aaPredicted RBP15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 ADPRHP54922 357 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 ADKP55263 362 aaKnown RBP15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 TPI1P60174 286 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 SERINC3Q13530 473 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 PARP15Q460N3 678 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 DAB2IPQ5VWQ8 1189 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 KIAA0895LQ68EN5 471 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 NCEH1Q6PIU2 408 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 DPY19L3Q6ZPD9 716 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 DGLUCYQ7Z3D6 616 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 CHST14Q8NCH0 376 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 CCDC114Q96M63 670 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 CHP1Q99653 195 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 KLC2Q9H0B6 622 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 TNKS2Q9H2K2 1166 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 LRRC19Q9H756 370 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 ZNHIT6Q9NWK9 470 aaKnown RBP15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 HPCAL4Q9UM19 191 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 FARP1Q9Y4F1 1045 aaPredicted RBP15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 SLCO1B1Q9Y6L6 691 aa15.76■□□□□ 0.11
ECHDC2-223ENST00000542552 DCDC2BA2VCK2 349 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 ZSCAN5CA6NGD5 496 aaPredicted RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 LRRC72A6NJI9 287 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 C4orf47A7E2U8 309 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 RASA4BC9J798 803 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 C1QTNF3-AMACRE9PGA6 284 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 RNF103O00237 685 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 EEF2KO00418 725 aaKnown RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 ARHGAP33O14559 1287 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 BCAT2O15382 392 aaPredicted RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 RASA4O43374 803 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 CD27P26842 260 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 CCR5P51681 352 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 CNTN1Q12860 1018 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 BOLA3Q53S33 107 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 AGBL4Q5VU57 503 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 AFMIDQ63HM1 303 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 RFX8Q6ZV50 586 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 CNGA4Q8IV77 575 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 ZCCHC9Q8N567 271 aaKnown RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 VOPP1Q96AW1 172 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 HMCESQ96FZ2 354 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 BTBD6Q96KE9 485 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 RBSNQ9H1K0 784 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 KDM4CQ9H3R0 1056 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 FSCN3Q9NQT6 498 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 DONSONQ9NYP3 566 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 IP6K2Q9UHH9 426 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 ANAPC7Q9UJX3 599 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 FCF1Q9Y324 198 aaKnown RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 WASF2Q9Y6W5 498 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 ASCC3Q8N3C0 2202 aaKnown RBP15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 SPTBN2O15020 2390 aa15.75■□□□□ 0.11
ECHDC2-223ENST00000542552 PLXNA2O75051 1894 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 AKR1B15C9JRZ8 316 aaPredicted RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 PLK4O00444 970 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 PLRG1O43660 514 aaKnown RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 BNIP3LO60238 219 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 FSBPO95073 299 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 PRNPP04156 253 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 NDST2P52849 883 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 TAS2R38P59533 333 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 BNC1Q01954 994 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 SLC25A11Q02978 314 aaKnown RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 DPYSQ14117 519 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 DPYSL2Q16555 572 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 TSR1Q2NL82 804 aaKnown RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 INO80DQ53TQ3 878 aaPredicted RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 CARD16Q5EG05 197 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 ARSIQ5FYB1 569 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 OR14C36Q8NHC7 312 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 TEKT4Q8WW24 435 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 CASKIN2Q8WXE0 1202 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 PACSIN1Q9BY11 444 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 MIR1-1HGQ9H1L0 117 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 NHEJ1Q9H9Q4 299 aaPredicted RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 EBF2Q9HAK2 575 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 CWC15Q9P013 229 aaKnown RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 UVRAGQ9P2Y5 699 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 IL36AQ9UHA7 158 aa15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 TPX2Q9ULW0 747 aaKnown RBP15.74■□□□□ 0.11
ECHDC2-223ENST00000542552 FAM47DPA6NHR8 397 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 MYO1FO00160 1098 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 LATO43561 262 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 GSRP00390 522 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 SYPP08247 313 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 H2AFZP0C0S5 128 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 TMEM253P0C7T8 217 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms