RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TMA16Q96EY4 203 aaKnown RBP11.21□□□□□ -0.61
SCG3-202ENST00000542355 CYTH2Q99418 400 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 MAGEH1Q9H213 219 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 RETREG1Q9H6L5 497 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 LRRC40Q9H9A6 602 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 SYBUQ9NX95 663 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 CFAP97Q9P2B7 532 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 SH3BP1Q9Y3L3 701 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 PCDHA11Q9Y5I1 949 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 CHD7Q9P2D1 2997 aa11.21□□□□□ -0.61
SCG3-202ENST00000542355 A0A1B0GVM2 712 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 TCAF2A6NFQ2 919 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 CCDC85CA6NKD9 419 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 TBL1XO60907 577 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 LATS1O95835 1130 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 RHOP08100 348 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 ATP5DP30049 168 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 TMED2Q15363 201 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 GPR158Q5T848 1215 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 Q6ZNB5 142 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 RTL10Q7L3V2 364 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 KDELC2Q7Z4H8 507 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 TDRPQ86YL5 185 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 TEX26Q8N6G2 289 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 ARFGAP2Q8N6H7 521 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 IPMKQ8NFU5 416 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 SHKBP1Q8TBC3 707 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 FATE1Q969F0 183 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 SAMD11Q96NU1 681 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 CASS4Q9NQ75 786 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 EURLQ9NYK6 297 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 BFARQ9NZS9 450 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 LGALS13Q9UHV8 139 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 SLC24A2Q9UI40 661 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 LSM7Q9UK45 103 aaKnown RBP11.21□□□□□ -0.62
SCG3-202ENST00000542355 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.62
SCG3-202ENST00000542355 CCDC195A0A1B0GUA6 201 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 TTC24A2A3L6 582 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 H0Y626 953 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PSMD3O43242 534 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 ATP9BO43861 1147 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PMPCBO75439 489 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 ANXA9O76027 345 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 RHOCP08134 193 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 TPH1P17752 444 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 STX2P32856 288 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 MSH2P43246 934 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 NTHL1P78549 312 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 SKOR1P84550 965 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 TEAD2Q15562 447 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CERCAMQ5T4B2 595 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 EMC10Q5UCC4 262 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 NAPEPLDQ6IQ20 393 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PDE12Q6L8Q7 609 aaKnown RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 HTR3DQ70Z44 454 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CHST9Q7L1S5 443 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 ADGRD2Q7Z7M1 963 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 SETD3Q86TU7 594 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 BBS7Q8IWZ6 715 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 RIBC1Q8N443 379 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 CARNMT1Q8N4J0 409 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 GSDMBQ8TAX9 411 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CAPS2Q9BXY5 557 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 ACTL7AQ9Y615 435 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CDH23Q9H251 3354 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 ILVBLA1L0T0 632 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CXorf49A8MYA2 514 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 LEFTY2O00292 366 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 XYLBO75191 536 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 MOSPD3O75425 235 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 C1RP00736 705 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CREB1P16220 341 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 KRT15P19012 456 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 GLDCP23378 1020 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 AVPR1AP37288 418 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 IFNAR2P48551 515 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 EPHA5P54756 1037 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 GEMP55040 296 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 FOXK1P85037 733 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 GUCY1A3Q02108 690 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 SLC5A9Q2M3M2 681 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 FSCBQ5H9T9 825 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 RNF219Q5W0B1 726 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 TRMT10BQ6PF06 316 aaKnown RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 CES3Q6UWW8 571 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 GRASPQ7Z6J2 395 aaPredicted RBP11.2□□□□□ -0.62
SCG3-202ENST00000542355 LINC00523Q86TU6 105 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 MDM1Q8TC05 714 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 ABHD8Q96I13 439 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 SELENOSQ9BQE4 189 aa11.2□□□□□ -0.62
SCG3-202ENST00000542355 PBX4Q9BYU1 374 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms