RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 HERC4Q5GLZ8 1057 aaPredicted RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ANKRD54Q6NXT1 300 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 SEM1Q6ZVN7 128 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 USP49Q70CQ1 688 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ZNF720Q7Z2F6 126 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 CD302Q8IX05 232 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 CEP57L1Q8IYX8 460 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 GPR135Q8IZ08 494 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 PDILTQ8N807 584 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 IL17RDQ8NFM7 739 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 TFAP2CQ92754 450 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 APIPQ96GX9 242 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 CCDC34Q96HJ3 373 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 OR14A2Q96R54 314 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 HERC2P3Q9BVR0 1158 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 APOL5Q9BWW9 433 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 CDT1Q9H211 546 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 TNMDQ9H2S6 317 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ST6GALNAC4Q9H4F1 302 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ZCCHC4Q9H5U6 513 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 TMEM206Q9H813 350 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 BRD9Q9H8M2 597 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 MRPL44Q9H9J2 332 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 RPF1Q9H9Y2 349 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ZMAT3Q9HA38 289 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 MAGEF1Q9HAY2 307 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 SLAMF7Q9NQ25 335 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 PANK4Q9NVE7 773 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ANKFY1Q9P2R3 1169 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 RCOR1Q9UKL0 485 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ADAM28Q9UKQ2 775 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 PHTF1Q9UMS5 762 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 TDRD15B5MCY1 1934 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 PLXNA4Q9HCM2 1894 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 SF3B1O75533 1304 aaKnown RBP eCLIP5.76□□□□□ -1.497e-6■■■■■ 28.7
CPSF7-220ENST00000541963 CDH23Q9H251 3354 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 SMIM28A0A1B0GU29 152 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 TCRBV7S2A1N4TA0A589 114 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 CASTOR2A6NHX0 329 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MYMKA6NI61 221 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ISM1B1AKI9 464 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 OGTO15294 1046 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 LINC01565O15544 149 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 B3GAT3O94766 335 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 LDHAP00338 332 aaKnown RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PIGRP01833 764 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 KITP10721 976 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 IL9P15248 144 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 KCNE1P15382 129 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PROZP22891 400 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PAX3P23760 479 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MGAT1P26572 445 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 NMT1P30419 496 aaKnown RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 CNR2P34972 360 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MTHFRP42898 656 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 NUCB2P80303 420 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 POU5F1Q01860 360 aaKnown RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PTPN14Q15678 1187 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 LONRF1Q17RB8 773 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 FAM214AQ32MH5 1076 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 XKR4Q5GH76 650 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ATXN7L2Q5T6C5 722 aaPredicted RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ADALQ6DHV7 355 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 FUT10Q6P4F1 479 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ALKAL1Q6UXT8 129 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 CYP26C1Q6V0L0 522 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 DOK3Q7L591 496 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 TMEM173Q86WV6 379 aaPredicted RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 CEP57Q86XR8 500 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ADHFE1Q8IWW8 467 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 GSPT2Q8IYD1 628 aaKnown RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 FAM186BQ8IYM0 893 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 SYCP3Q8IZU3 236 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 KRT78Q8N1N4 520 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 D2HGDHQ8N465 521 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 SYT8Q8NBV8 401 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PARD3BQ8TEW8 1205 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 HDAC7Q8WUI4 952 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 DHX58Q96C10 678 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ZBTB45Q96K62 511 aaPredicted RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MSLNLQ96KJ4 702 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 RIPOR3Q96MK2 946 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 NECTIN4Q96NY8 510 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 KLHL5Q96PQ7 755 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ACCSQ96QU6 501 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 TBCBQ99426 244 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MSTO1Q9BUK6 570 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 SCAND2PQ9GZW5 306 aaPredicted RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 BTBD1Q9H0C5 482 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ADAM7Q9H2U9 754 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MRPL46Q9H2W6 279 aaKnown RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 NLRC4Q9NPP4 1024 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 KLHL11Q9NVR0 708 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 MARCH5Q9NX47 278 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PLA2G3Q9NZ20 509 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 FNIP2Q9P278 1114 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 ZDHHC8Q9ULC8 765 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 BARX2Q9UMQ3 279 aaPredicted RBP5.76□□□□□ -1.49
CPSF7-220ENST00000541963 PCDHA7Q9UN72 937 aa5.76□□□□□ -1.49
CPSF7-220ENST00000541963 TCF20Q9UGU0 1960 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms