RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 WASF2Q9Y6W5 498 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 TRPM6Q9BX84 2022 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 A0A1W2PNU3 283 aaPredicted RBP15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 PMS2P1A4D2B8 440 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 POM121BA6NF01 834 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 MPOP05164 745 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 NOS2P35228 1153 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 CXCR3P49682 368 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 SULT1E1P49888 294 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 RNASE9P60153 205 aaKnown RBP15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 DAB2P98082 770 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 ARSIQ5FYB1 569 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 LRRC69Q6ZNQ3 347 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 DPY19L3Q6ZPD9 716 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 FGF11Q92914 225 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 BMFQ96LC9 184 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 APOLD1Q96LR9 279 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 TBCBQ99426 244 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 GPR27Q9NS67 375 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 KLF15Q9UIH9 416 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 BSNQ9UPA5 3926 aa15.82■□□□□ 0.12
CLSTN3-213ENST00000541953 FOXN3O00409 490 aaPredicted RBP15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 OPA1O60313 960 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 LEFTY1O75610 366 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 ZMPSTE24O75844 475 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 HNRNPA2B1P22626 353 aaKnown RBP15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 NUDT1P36639 197 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 OXCT1P55809 520 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 ABI3BPQ7Z7G0 1075 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 CREBRFQ8IUR6 639 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 DCAF4L2Q8NA75 395 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 NT5C3BQ969T7 300 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 GGT7Q9UJ14 662 aa15.81■□□□□ 0.12
CLSTN3-213ENST00000541953 IGLV3-10A0A075B6K4 115 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 DRGXA6NNA5 263 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 RRP8O43159 456 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 SPINT1O43278 529 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 MAGEC1O60732 1142 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 PCDH8O95206 1070 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 CD160O95971 181 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 CKMT1AP12532 417 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 GKP32189 559 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 FLT3P36888 993 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 CXADRP78310 365 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 ARF5P84085 180 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 FZD2Q14332 565 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 DRAP1Q14919 205 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 EXOC3L4Q17RC7 722 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 GBP6Q6ZN66 633 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 Q6ZSR6 202 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 ERN2Q76MJ5 926 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 PARS2Q7L3T8 475 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 PTAR1Q7Z6K3 402 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 CACTIN-AS1Q8N1I8 211 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 ZNF843Q8N446 348 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 TMIEQ8NEW7 156 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 BAP1Q92560 729 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 HIC2Q96JB3 615 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 C2orf49Q9BVC5 232 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 IL36AQ9UHA7 158 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 DNAJC12Q9UKB3 198 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 PNMA8BQ9ULN7 279 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 ITM2BQ9Y287 266 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 KIF26BQ2KJY2 2108 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 CHD5Q8TDI0 1954 aa15.8■□□□□ 0.12
CLSTN3-213ENST00000541953 K7ESM1 405 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 CSO75390 466 aaKnown RBP15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 AKT2P31751 481 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 ABL2P42684 1182 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 GABREP78334 506 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 XYLT1Q86Y38 959 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 OR6K2Q8NGY2 324 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 KLF6Q99612 283 aaPredicted RBP15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 HDAC8Q9BY41 377 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 MAGEB5Q9BZ81 275 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 OSBPL2Q9H1P3 480 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 TCEAL2Q9H3H9 227 aaPredicted RBP15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 WDCPQ9H6R7 721 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 CPNE5Q9HCH3 593 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 NDFIP2Q9NV92 336 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 DNAJC28Q9NX36 388 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 FCF1Q9Y324 198 aaKnown RBP15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 BOD1L1Q8NFC6 3051 aa15.79■□□□□ 0.12
CLSTN3-213ENST00000541953 USP12O75317 370 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 PAK4O96013 591 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 PRNPP04156 253 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 ADRB3P13945 408 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 PLA2G2AP14555 144 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 TGM2P21980 687 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 ACTN2P35609 894 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 SERPINH1P50454 418 aaKnown RBP15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 KRT83P78385 493 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 PTK2Q05397 1052 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 DEUP1Q05D60 604 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms