RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 Q8N9G6 341 aaPredicted RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 PMEPA1Q969W9 287 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 DNAJC19Q96DA6 116 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 PRICKLE1Q96MT3 831 aaPredicted RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 CDK5RAP1Q96SZ6 601 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 DONSONQ9NYP3 566 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 IFNKQ9P0W0 207 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 IPO11Q9UI26 975 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 PCDHB13Q9Y5F0 798 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 SRPRBQ9Y5M8 271 aaKnown RBP10.03□□□□□ -0.8
CHFR-220ENST00000541817 USP3Q9Y6I4 520 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 F8P00451 2351 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
CHFR-220ENST00000541817 A0A1W2PQC6 194 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 H3BM21 787 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 KIF2AO00139 706 aaPredicted RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 RNF103O00237 685 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 CLIC2O15247 247 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 RAD51BO15315 384 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 SPINT1O43278 529 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 CCP110O43303 1012 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 PCDH8O95206 1070 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 STAU1O95793 577 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 SRPRAP08240 638 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 SKILP12757 684 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 CCL4P13236 92 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 TNNT1P13805 278 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 NME1P15531 152 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 ATICP31939 592 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 RPIAP49247 311 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 CYP2J2P51589 502 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 ARSDP51689 593 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 FANCCQ00597 558 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 ECT2LQ008S8 904 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 MYL5Q02045 173 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 CYP24A1Q07973 514 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 EIF2B5Q13144 721 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 MRPL49Q13405 166 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 BIRC3Q13489 604 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 PNOCQ13519 176 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 GLIPR1L2Q4G1C9 344 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 FAM133BQ5BKY9 247 aaKnown RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 PRRT3Q5FWE3 981 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 RNF219Q5W0B1 726 aaPredicted RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 SPOPLQ6IQ16 392 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 IL22RA1Q8N6P7 574 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 WDR48Q8TAF3 677 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 FIBINQ8TAL6 211 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 NAT6Q93015 286 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 SMARCE1Q969G3 411 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 MOCOSQ96EN8 888 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 IFT43Q96FT9 208 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 NCKIPSDQ9NZQ3 722 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 FBXO2Q9UK22 296 aaPredicted RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 ITGB1BP2Q9UKP3 347 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.81
CHFR-220ENST00000541817 CSNK1G3Q9Y6M4 447 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 NF1P21359 2839 aa10.02□□□□□ -0.81
CHFR-220ENST00000541817 ESPL1Q14674 2120 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 TNRC6AQ8NDV7 1962 aaKnown RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 SPTY2D1-AS1A0A0U1RR47 76 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 ARHGAP10A1A4S6 786 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 A6NNZ2 444 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 TTLL8A6PVC2 850 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 YY2O15391 372 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 SLC7A4O43246 635 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 CNTN5O94779 1100 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 VNN1O95497 513 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 PAK4O96013 591 aaPredicted RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 SERPINC1P01008 464 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 ZNF18P17022 549 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 OAS2P29728 719 aaKnown RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 CCKBRP32239 447 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 PDE1CQ14123 709 aaPredicted RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 FGL2Q14314 439 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 PSMD6Q15008 389 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 ACCSLQ4AC99 568 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 CT47A1Q5JQC4 288 aaPredicted RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 PPP1R26Q5T8A7 1209 aaPredicted RBP10.01□□□□□ -0.81
CHFR-220ENST00000541817 PIP5KL1Q5T9C9 394 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 ISM2Q6H9L7 571 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 NADSYN1Q6IA69 706 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 PARGQ86W56 976 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 HORMAD1Q86X24 394 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 MLKLQ8NB16 471 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 KYQ8NBH2 561 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 CPT1CQ8TCG5 803 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 PLEKHO2Q8TD55 490 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 GLMNQ92990 594 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 TCTN2Q96GX1 697 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 POM121Q96HA1 1249 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 TMEM74Q96NL1 305 aa10.01□□□□□ -0.81
CHFR-220ENST00000541817 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms