RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 CNOT9Q92600 299 aaKnown RBP3.19□□□□□ -1.9
KNTC1-212ENST00000541466 SLC25A28Q96A46 364 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 MSI2Q96DH6 328 aaKnown RBP3.19□□□□□ -1.9
KNTC1-212ENST00000541466 MAELQ96JY0 434 aaKnown RBP3.19□□□□□ -1.9
KNTC1-212ENST00000541466 ZNF48Q96MX3 618 aaPredicted RBP3.19□□□□□ -1.9
KNTC1-212ENST00000541466 CXorf56Q9H5V9 222 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 EPHX3Q9H6B9 360 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 ZBTB40Q9NUA8 1239 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 ZDHHC7Q9NXF8 308 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 TBC1D14Q9P2M4 693 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 FBXO40Q9UH90 709 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 HSF4Q9ULV5 492 aa3.19□□□□□ -1.9
KNTC1-212ENST00000541466 TARSL2A2RTX5 802 aaKnown RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 PER2O15055 1255 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 KIF1CO43896 1103 aaKnown RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 ATG13O75143 517 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 ADAP00813 363 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 IGKV2-30P06310 120 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 HNRNPA1P09651 372 aaKnown RBP eCLIP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 TBXAS1P24557 533 aaPredicted RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 TNFSF8P32971 234 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 RFC1P35251 1148 aaPredicted RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 PSMC2P35998 433 aaKnown RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 GPD2P43304 727 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 CCT4P50991 539 aaKnown RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 VAMP2P63027 116 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 TDGQ13569 410 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 LAMB3Q13751 1172 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 NFIL3Q16649 462 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 ME3Q16798 604 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 ALFQ53S48 1182 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 WDR45BQ5MNZ6 344 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 ASPHD1Q5U4P2 390 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 SLC22A25Q6T423 547 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 LRRC8DQ7L1W4 858 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 GPSM1Q86YR5 675 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 CAMK1DQ8IU85 385 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 LSM14AQ8ND56 463 aaKnown RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 SETD9Q8NE22 299 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 HDAC7Q8WUI4 952 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 RAB40AQ8WXH6 277 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 HSPH1Q92598 858 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 EYA3Q99504 573 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 B3GNT4Q9C0J1 378 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 LMAN2LQ9H0V9 348 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 TAOK3Q9H2K8 898 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 MAP6D1Q9H9H5 199 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 TMEM160Q9NX00 188 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 GGA3Q9NZ52 723 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 GRHL1Q9NZI5 618 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 IFT80Q9P2H3 777 aaPredicted RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 HDAC6Q9UBN7 1215 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 PLEKHB1Q9UF11 243 aaPredicted RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 CNOT7Q9UIV1 285 aaKnown RBP3.18□□□□□ -1.9
KNTC1-212ENST00000541466 TBX20Q9UMR3 447 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 CNPY2Q9Y2B0 182 aa3.18□□□□□ -1.9
KNTC1-212ENST00000541466 CCDC196A0A1B0GTZ2 297 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 C17orf102A2RUQ5 167 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 GAGE12JA6NER3 117 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 DDTLA6NHG4 134 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 FAM90A7PA6NKC0 464 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 FAM90A22PA8MWA6 464 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 FAM90A12PA8MX19 464 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 FAM90A23PA8MXZ1 464 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 B4DGG1 531 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 RNMTO43148 476 aaKnown RBP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 HOXC11O43248 304 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 CEP104O60308 925 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 AGR2O95994 175 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 IFNA2P01563 188 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 KLKB1P03952 638 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 CHRM4P08173 479 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 MMP3P08254 477 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 TNFRSF1BP20333 461 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 DPP6P42658 865 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 NR4A2P43354 598 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 ENTPD1P49961 510 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 GALNT2Q10471 571 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 GPR68Q15743 365 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 SLC18A3Q16572 532 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 ZNF260Q3ZCT1 412 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 NAPEPLDQ6IQ20 393 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 PARM1Q6UWI2 310 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 SERPINA11Q86U17 422 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 MON1AQ86VX9 555 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 CHD1LQ86WJ1 897 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 TMTC1Q8IUR5 882 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 ESX1Q8N693 406 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 HTRA1Q92743 480 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 ATOH1Q92858 354 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 EIF2AK1Q9BQI3 630 aaKnown RBP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 FAM234AQ9H0X4 552 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 SLC32A1Q9H598 525 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 KRCC1Q9NPI7 259 aaPredicted RBP3.17□□□□□ -1.9
KNTC1-212ENST00000541466 ATP8A2Q9NTI2 1148 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 PDP2Q9P2J9 529 aa3.17□□□□□ -1.9
KNTC1-212ENST00000541466 NLKQ9UBE8 527 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms