RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 CCDC78A2IDD5 438 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 HDAC3O15379 428 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 PIGNO95427 931 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 IGHA2P01877 340 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 MPOP05164 745 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 TFEBP19484 476 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 GRIA4P48058 902 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 GLRBP48167 497 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 SULT1E1P49888 294 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 SNX16P57768 344 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 ARHGAP1Q07960 439 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 ARHGEF6Q15052 776 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 RAET1EQ8TD07 263 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 RNF139Q8WU17 664 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 C18orf25Q96B23 403 aaPredicted RBP10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 CNDP1Q96KN2 507 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 ZMAT2Q96NC0 199 aaKnown RBP10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 KLHL32Q96NJ5 620 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 APOL2Q9BQE5 337 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 MRPS26Q9BYN8 205 aaKnown RBP10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 RBM38Q9H0Z9 239 aaKnown RBP10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 TASP1Q9H6P5 420 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 WDR41Q9HAD4 459 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 IARS2Q9NSE4 1012 aaKnown RBP10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 TUBGCP4Q9UGJ1 667 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 SLC39A10Q9ULF5 831 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 VANGL2Q9ULK5 521 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 RAP2CQ9Y3L5 183 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 TRIM17Q9Y577 477 aa10.71□□□□□ -0.69
PHACTR3-209ENST00000541461 hCG_2014768A0A024R1R8 64 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 DYNC1LI2O43237 492 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TNFAIP8O95379 198 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 MYCP01106 439 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 SBK3P0C264 359 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TPH1P17752 444 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 LMO2P25791 158 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 SH3BGRP55822 239 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 BST2Q10589 180 aaKnown RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 PDK1Q15118 436 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TMEM135Q86UB9 458 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 AHI1Q8N157 1196 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TMEM151AQ8N4L1 468 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ADCY4Q8NFM4 1077 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 SREK1Q8WXA9 508 aaKnown RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 FAM149B1Q96BN6 582 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 NPAS2Q99743 824 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ACE2Q9BYF1 805 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 SENP6Q9GZR1 1112 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 CHRAC1Q9NRG0 131 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 KLHL8Q9P2G9 620 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 IGSF9Q9P2J2 1179 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TMCO1Q9UM00 188 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 NUP205Q92621 2012 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TSPAN1O60635 241 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 FAM58BPP0C7Q3 252 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ME2P23368 584 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 PCSK6P29122 969 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 PPARGP37231 505 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 AVPR1AP37288 418 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 MATKP42679 507 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 NAGLUP54802 743 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 MPP3Q13368 585 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ART3Q13508 389 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 IRF5Q13568 498 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 PPP2R5DQ14738 602 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 GRM3Q14832 879 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 DCAF6Q58WW2 860 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 GLRA4Q5JXX5 417 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 MFSD14CQ5VZR4 134 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ZFP1Q6P2D0 407 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 STRADAQ7RTN6 431 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 LCA5Q86VQ0 697 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 PSTKQ8IV42 348 aaKnown RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 CPSF7Q8N684 471 aaKnown RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ANKRD52Q8NB46 1076 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ZSCAN18Q8TBC5 510 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 NLRP7Q8WX94 980 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 TMA16Q96EY4 203 aaKnown RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ZFRQ96KR1 1074 aaKnown RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 DRC3Q9H069 523 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ZNF385DQ9H6B1 395 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 ZNF696Q9H7X3 374 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 C20orf96Q9NUD7 363 aaPredicted RBP10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 BFARQ9NZS9 450 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 VPS28Q9UK41 221 aa10.7□□□□□ -0.7
PHACTR3-209ENST00000541461 BPTFQ12830 3046 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 PRSS51A0A1B0GVH4 220 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 RBM47A0AV96 593 aaKnown RBP10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 H3BSA7 217 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 PHGDHO43175 533 aaKnown RBP10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 RNASEH2AO75792 299 aaKnown RBP10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 TMCC1O94876 653 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 ZNF286BP0CG31 522 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 PTPN3P26045 913 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 NME3Q13232 169 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 ZNF618Q5T7W0 954 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 OTUD1Q5VV17 481 aaPredicted RBP10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 LIPMQ5VYY2 423 aa10.69□□□□□ -0.7
PHACTR3-209ENST00000541461 ARHGAP17Q68EM7 881 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms