RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NSMCE1Q8WV22 266 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 CCDC114Q96M63 670 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 FAM129BQ96TA1 746 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 OSBPL8Q9BZF1 889 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 IRF2BPLQ9H1B7 796 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 TNKS2Q9H2K2 1166 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 FCF1Q9Y324 198 aaKnown RBP15.79■□□□□ 0.12
DDB1-218ENST00000540784 MCF2LO15068 1137 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 MAFKO60675 156 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 TJP3O95049 919 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 CCNCP24863 283 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 MSNP26038 577 aaKnown RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 GARSP41250 739 aaKnown RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 COPAP53621 1224 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 ZNF211Q13398 564 aaPredicted RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 RFTN1Q14699 578 aaPredicted RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 CARD16Q5EG05 197 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 ZNF569Q5MCW4 686 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 CCDC181Q5TID7 509 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 C22orf39Q6P5X5 142 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 NPNTQ6UXI9 565 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 Q6ZVU0 165 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 DSG4Q86SJ6 1040 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 WDR5BQ86VZ2 330 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 LONP2Q86WA8 852 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 RASSF3Q86WH2 238 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 CCNYQ8ND76 341 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 MDGA1Q8NFP4 955 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 OR8D1Q8WZ84 308 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 PRCCQ92733 491 aaPredicted RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 P3H4Q92791 437 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 SIPA1Q96FS4 1042 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 MRGPRX1Q96LB2 322 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 ZNF599Q96NL3 588 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 TSGA13Q96PP4 275 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 MKRN2Q9H000 416 aaKnown RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 RSPH9Q9H1X1 276 aaPredicted RBP15.78■□□□□ 0.12
DDB1-218ENST00000540784 PDFQ9HBH1 243 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 ZSCAN32Q9NX65 697 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 DTLQ9NZJ0 730 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 HCN4Q9Y3Q4 1203 aa15.78■□□□□ 0.12
DDB1-218ENST00000540784 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 ZNF821O75541 412 aaPredicted RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 TMCC1O94876 653 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 MAP3K6O95382 1288 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 ACADMP11310 421 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 NDUFV2P19404 249 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 TGM2P21980 687 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 PTPN7P35236 360 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 RPS14P62263 151 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 SNRPD1P62314 119 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 ADCY2Q08462 1091 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 ELAVL3Q14576 367 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 PDK1Q15118 436 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 USP39Q53GS9 565 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 TMCO4Q5TGY1 634 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 TIGD7Q6NT04 549 aaPredicted RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 AADACL2Q6P093 401 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 KIAA1324Q6UXG2 1013 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 BBS12Q6ZW61 710 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 MMAAQ8IVH4 418 aaKnown RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 RYBPQ8N488 228 aaPredicted RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 PRSS33Q8NF86 280 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 OR2A12Q8NGT7 310 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 NELL1Q92832 810 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 SLC6A17Q9H1V8 727 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 SAE1Q9UBE0 346 aaPredicted RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 HECAQ9UBI9 543 aaPredicted RBP15.77■□□□□ 0.12
DDB1-218ENST00000540784 JRKLQ9Y4A0 524 aa15.77■□□□□ 0.12
DDB1-218ENST00000540784 USP27XA6NNY8 438 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 ALOX15BO15296 676 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 POP4O95707 220 aaKnown RBP15.76■□□□□ 0.11
DDB1-218ENST00000540784 IL1BP01584 269 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 DNTTP04053 509 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 CHRNA3P32297 505 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 RENBPP51606 427 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 PTPN5P54829 565 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 RHOAP61586 193 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 ZBTB16Q05516 673 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 TCF15Q12870 199 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 BYSLQ13895 437 aaKnown RBP15.76■□□□□ 0.11
DDB1-218ENST00000540784 LBRQ14739 615 aaKnown RBP15.76■□□□□ 0.11
DDB1-218ENST00000540784 MYLK3Q32MK0 819 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 MARC1Q5VT66 337 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 ZNF776Q68DI1 518 aaPredicted RBP15.76■□□□□ 0.11
DDB1-218ENST00000540784 DPY19L3Q6ZPD9 716 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 BBS5Q8N3I7 341 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 CINPQ9BW66 212 aaPredicted RBP15.76■□□□□ 0.11
DDB1-218ENST00000540784 TPSD1Q9BZJ3 242 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 TM6SF2Q9BZW4 377 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 BRD8Q9H0E9 1235 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 ITM2CQ9NQX7 267 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 SEPT3Q9UH03 358 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 PCDHGA2Q9Y5H1 932 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 KMT2EQ8IZD2 1858 aa15.76■□□□□ 0.11
DDB1-218ENST00000540784 KCNK3O14649 394 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 PPP1R12AO14974 1030 aaPredicted RBP15.75■□□□□ 0.11
DDB1-218ENST00000540784 MATN3O15232 486 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 ZNF217O75362 1048 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms