RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KRT3	P12035	628 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NFKBIA	P25963	317 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	OR1D2	P34982	312 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FDFT1	P37268	417 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GRIA1	P42261	906 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PPP3CC	P48454	512 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CRADD	P78560	199 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TBL3	Q12788	808 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SFSWAP	Q12872	951 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CYTH1	Q15438	398 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C6orf52	Q5T4I8	152 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DUS1L	Q6P1R4	473 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	B3GNT6	Q6ZMB0	384 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C15orf39	Q6ZRI6	1047 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FRMD7	Q6ZUT3	714 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	OTOP3	Q7RTS5	596 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MPP5	Q8N3R9	675 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TFB1M	Q8WVM0	346 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FBXO32	Q969P5	355 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HSPBAP1	Q96EW2	488 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRICKLE1	Q96MT3	831 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CERS4	Q9HA82	394 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GPATCH2L	Q9NWQ4	482 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CLDND1	Q9NY35	253 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SIRPG	Q9P1W8	387 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF711	Q9Y462	761 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLXNB2	O15031	1838 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HMX2	A2RU54	273 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZBTB42	B2RXF5	422 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMEM189-UBE2V1	I3L0A0	370 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KCNN4	O15554	427 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GRAP2	O75791	330 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMCC1	O94876	653 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDK4	P11802	303 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MYL4	P12829	197 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RPL5	P46777	297 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ADAR	P55265	1226 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	YWHAZ	P63104	245 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DEFB103A	P81534	67 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPS22	P82650	360 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CNGA3	Q16281	694 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDO1	Q16878	200 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EML3	Q32P44	896 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DENND1B	Q6P3S1	775 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KYAT3	Q6YP21	454 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AGMO	Q6ZNB7	445 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BBS12	Q6ZW61	710 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAVS	Q7Z434	540 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	WDR75	Q8IWA0	830 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAP7D3	Q8IWC1	876 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TTC13	Q8NBP0	860 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KREMEN2	Q8NCW0	462 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ADAM32	Q8TC27	787 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DCUN1D1	Q96GG9	259 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	VCPIP1	Q96JH7	1222 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLEKHG4B	Q96PX9	1271 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ACBD6	Q9BR61	282 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLAC1	Q9HBJ0	212 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TLR8	Q9NR97	1041 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RRN3	Q9NYV6	651 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FETUB	Q9UGM5	382 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BACE2	Q9Y5Z0	518 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GOLGA8Q	A0A0J9YX86	632 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SMIM31	A0A1B0GVY4	71 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GOLGA8O	A6NCC3	632 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NT5C1B-RDH14	C9J2C7	533 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GOLGA8N	F8WBI6	632 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLF11	O14901	512 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SUPT3H	O75486	399 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF189	O75820	626 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CTSA	P10619	480 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TCN1	P20061	433 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ITGAX	P20702	1163 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARRB2	P32121	409 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ERVK-21	P61565	698 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PSMC1	P62191	440 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ROR1	Q01973	937 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TUBB3	Q13509	450 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GRM2	Q14416	872 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PIGH	Q14442	188 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTPN20	Q4JDL3	420 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PPM1J	Q5JR12	505 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LRRC38	Q5VT99	294 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BSPRY	Q5W0U4	402 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	WSCD1	Q658N2	575 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FAM91A1	Q658Y4	838 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AAGAB	Q6PD74	315 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AMIGO2	Q86SJ2	522 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC39A11	Q8N1S5	342 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NETO2	Q8NC67	525 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KCNN1	Q92952	543 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	USP13	Q92995	863 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMEM176A	Q96HP8	235 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PGLYRP2	Q96PD5	576 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPL1	Q9BYD6	325 aa	Known RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF518B	Q9C0D4	1074 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SFXN1	Q9H9B4	322 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COPS7B	Q9H9Q2	264 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF358	Q9NW07	568 aa		5.77	□□□□□ -1.49

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