RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TSG101Q99816 390 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 MYOCQ99972 504 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CLMPQ9H6B4 373 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 ACP6Q9NPH0 428 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 ST7Q9NRC1 585 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 THSD1Q9NS62 852 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 RMND1Q9NWS8 449 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 DDIT4Q9NX09 232 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 VPS51Q9UID3 782 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 SLC25A13Q9UJS0 675 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 VPS28Q9UK41 221 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 SATB2Q9UPW6 733 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 ENTPD2Q9Y5L3 495 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 HS3ST4Q9Y661 456 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 HS3ST3A1Q9Y663 406 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CSNK1G3Q9Y6M4 447 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 WASF2Q9Y6W5 498 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 KIF26BQ2KJY2 2108 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 TRPM6Q9BX84 2022 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 NBASA2RRP1 2371 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 USP9XQ93008 2570 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 IGLV3-10A0A075B6K4 115 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 EME2A4GXA9 379 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 NEMP2A6NFY4 417 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 DRGXA6NNA5 263 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 A6NNZ2 444 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 BECN2A8MW95 431 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 TPP1O14773 563 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 CASC3O15234 703 aaKnown RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 SPINT1O43278 529 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 EFSO43281 561 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 AP1G1O43747 822 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 HSF2BPO75031 334 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 PAGE1O75459 146 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 TCEA3O75764 348 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ZMPSTE24O75844 475 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 PRNPP04156 253 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ALPPL2P10696 532 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 RRM1P23921 792 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 GGCXP38435 758 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 DUSP3P51452 185 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 CLCN6P51797 869 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 CDH4P55283 916 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 MARSP56192 900 aaKnown RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 PFN3P60673 137 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 HNRNPKP61978 463 aaKnown RBP eCLIP7.47□□□□□ -1.21
YBX3-209ENST00000540747 CDK17Q00537 523 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 EIF2B5Q13144 721 aaKnown RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 CLN3Q13286 438 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 MTA1Q13330 715 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ZNF177Q13360 481 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 ACCSLQ4AC99 568 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ALFQ53S48 1182 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ZNF542PQ5EBM4 170 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 OR6B2Q6IFH4 312 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ZCCHC8Q6NZY4 707 aaKnown RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 GUSBP11Q6P575 273 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 C22orf39Q6P5X5 142 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 OLFML1Q6UWY5 402 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 DPY19L3Q6ZPD9 716 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 Q6ZSR6 202 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 SLC26A9Q7LBE3 791 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 DEFB106AQ8N104 65 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 DCAF4L2Q8NA75 395 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ZNF397Q8NF99 534 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 IFI44Q8TCB0 444 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 MAPK15Q8TD08 544 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 NT5C3BQ969T7 300 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 GBP4Q96PP9 640 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 LENG8Q96PV6 779 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 PPP1R9BQ96SB3 815 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 DUSP23Q9BVJ7 150 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 BOCQ9BWV1 1114 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 C1QTNF2Q9BXJ5 285 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 CALN1Q9BXU9 219 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 SCAND2PQ9GZW5 306 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 INTS2Q9H0H0 1204 aaKnown RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 FAM204AQ9H8W3 233 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ARHGEF38Q9NXL2 777 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 SLC12A6Q9UHW9 1150 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 SALL4Q9UJQ4 1053 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 ACSL6Q9UKU0 697 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 VANGL2Q9ULK5 521 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 PNMA8BQ9ULN7 279 aaPredicted RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
YBX3-209ENST00000540747 TDRD6O60522 2096 aaKnown RBP7.47□□□□□ -1.21
YBX3-209ENST00000540747 SPTAN1Q13813 2472 aaKnown RBP7.46□□□□□ -1.21
YBX3-209ENST00000540747 RELNP78509 3460 aa7.46□□□□□ -1.21
YBX3-209ENST00000540747 A0A0D9SEW6 157 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PYCARD-AS1I3L0S3 204 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 KPNA3O00505 521 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 NTN3O00634 580 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 DAB1O75553 588 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 LEFTY1O75610 366 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 LETM1O95202 739 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 WISP1O95388 367 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 ADCY5O95622 1261 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 CD160O95971 181 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 ADRB3P13945 408 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms