RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 EIF3EP60228 445 aaKnown RBP8.83□□□□□ -1
DDB1-217ENST00000540166 SMTNL2Q2TAL5 461 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ATAT1Q5SQI0 421 aa8.83□□□□□ -1
DDB1-217ENST00000540166 PTCRAQ6ISU1 281 aaPredicted RBP8.83□□□□□ -1
DDB1-217ENST00000540166 LRRC8EQ6NSJ5 796 aa8.83□□□□□ -1
DDB1-217ENST00000540166 MFSD7Q6UXD7 560 aa8.83□□□□□ -1
DDB1-217ENST00000540166 SCARA5Q6ZMJ2 495 aa8.83□□□□□ -1
DDB1-217ENST00000540166 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
DDB1-217ENST00000540166 POLNQ7Z5Q5 900 aa8.83□□□□□ -1
DDB1-217ENST00000540166 SETD3Q86TU7 594 aaPredicted RBP8.83□□□□□ -1
DDB1-217ENST00000540166 SNX32Q86XE0 403 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ADAMTS19Q8TE59 1207 aa8.83□□□□□ -1
DDB1-217ENST00000540166 USP33Q8TEY7 942 aa8.83□□□□□ -1
DDB1-217ENST00000540166 STARD8Q92502 1023 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CD101Q93033 1021 aa8.83□□□□□ -1
DDB1-217ENST00000540166 C12orf43Q96C57 262 aaKnown RBP8.83□□□□□ -1
DDB1-217ENST00000540166 C16orf70Q9BSU1 422 aa8.83□□□□□ -1
DDB1-217ENST00000540166 C2orf40Q9H1Z8 148 aa8.83□□□□□ -1
DDB1-217ENST00000540166 ZNF395Q9H8N7 513 aaPredicted RBP8.83□□□□□ -1
DDB1-217ENST00000540166 KCNK13Q9HB14 408 aa8.83□□□□□ -1
DDB1-217ENST00000540166 DDX56Q9NY93 547 aaKnown RBP8.83□□□□□ -1
DDB1-217ENST00000540166 CEPT1Q9Y6K0 416 aa8.83□□□□□ -1
DDB1-217ENST00000540166 CYB561D2O14569 222 aa8.82□□□□□ -1
DDB1-217ENST00000540166 AOC1P19801 751 aa8.82□□□□□ -1
DDB1-217ENST00000540166 GARSP41250 739 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 NOVP48745 357 aa8.82□□□□□ -1
DDB1-217ENST00000540166 BNIP3Q12983 259 aa8.82□□□□□ -1
DDB1-217ENST00000540166 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
DDB1-217ENST00000540166 TRIM72Q6ZMU5 477 aa8.82□□□□□ -1
DDB1-217ENST00000540166 DCDC5Q6ZRR9 648 aa8.82□□□□□ -1
DDB1-217ENST00000540166 KATNAL2Q8IYT4 538 aa8.82□□□□□ -1
DDB1-217ENST00000540166 FAM71DQ8N9W8 422 aa8.82□□□□□ -1
DDB1-217ENST00000540166 TMIGD2Q96BF3 282 aa8.82□□□□□ -1
DDB1-217ENST00000540166 SERAC1Q96JX3 654 aa8.82□□□□□ -1
DDB1-217ENST00000540166 OLFM1Q99784 485 aa8.82□□□□□ -1
DDB1-217ENST00000540166 FRMD8Q9BZ67 464 aaPredicted RBP8.82□□□□□ -1
DDB1-217ENST00000540166 CEP44Q9C0F1 390 aa8.82□□□□□ -1
DDB1-217ENST00000540166 DNAI2Q9GZS0 605 aa8.82□□□□□ -1
DDB1-217ENST00000540166 EFCAB1Q9HAE3 211 aa8.82□□□□□ -1
DDB1-217ENST00000540166 HMG20AQ9NP66 347 aa8.82□□□□□ -1
DDB1-217ENST00000540166 RAB6BQ9NRW1 208 aa8.82□□□□□ -1
DDB1-217ENST00000540166 GIMAP4Q9NUV9 329 aa8.82□□□□□ -1
DDB1-217ENST00000540166 GNPTGQ9UJJ9 305 aa8.82□□□□□ -1
DDB1-217ENST00000540166 NOTOA8MTQ0 251 aa8.82□□□□□ -1
DDB1-217ENST00000540166 TAF4O00268 1085 aa8.82□□□□□ -1
DDB1-217ENST00000540166 GAS2O43903 313 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 GPC4O75487 556 aa8.82□□□□□ -1
DDB1-217ENST00000540166 CCNA2P20248 432 aa8.82□□□□□ -1
DDB1-217ENST00000540166 POLR2BP30876 1174 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 BMPR1AP36894 532 aa8.82□□□□□ -1
DDB1-217ENST00000540166 GSSP48637 474 aa8.82□□□□□ -1
DDB1-217ENST00000540166 FBXO47Q5MNV8 452 aa8.82□□□□□ -1
DDB1-217ENST00000540166 OGFRL1Q5TC84 451 aaPredicted RBP8.82□□□□□ -1
DDB1-217ENST00000540166 CCSAPQ6IQ19 270 aaPredicted RBP8.82□□□□□ -1
DDB1-217ENST00000540166 SCYL2Q6P3W7 929 aa8.82□□□□□ -1
DDB1-217ENST00000540166 NOTUMQ6P988 496 aa8.82□□□□□ -1
DDB1-217ENST00000540166 GALNT18Q6P9A2 607 aa8.82□□□□□ -1
DDB1-217ENST00000540166 ELMOD1Q8N336 334 aa8.82□□□□□ -1
DDB1-217ENST00000540166 TMEM35BQ8NCS4 154 aa8.82□□□□□ -1
DDB1-217ENST00000540166 LMO3Q8TAP4 145 aa8.82□□□□□ -1
DDB1-217ENST00000540166 C17orf80Q9BSJ5 609 aa8.82□□□□□ -1
DDB1-217ENST00000540166 EHD1Q9H4M9 534 aa8.82□□□□□ -1
DDB1-217ENST00000540166 PLLPQ9Y342 182 aa8.82□□□□□ -1
DDB1-217ENST00000540166 AP1G1O43747 822 aa8.82□□□□□ -1
DDB1-217ENST00000540166 DGAT1O75907 488 aa8.82□□□□□ -1
DDB1-217ENST00000540166 TYK2P29597 1187 aa8.82□□□□□ -1
DDB1-217ENST00000540166 NRIP1P48552 1158 aa8.82□□□□□ -1
DDB1-217ENST00000540166 SERPINB9P50453 376 aa8.82□□□□□ -1
DDB1-217ENST00000540166 MYBPC1Q00872 1141 aa8.82□□□□□ -1
DDB1-217ENST00000540166 PTK2BQ14289 1009 aa8.82□□□□□ -1
DDB1-217ENST00000540166 MAPK11Q15759 364 aa8.82□□□□□ -1
DDB1-217ENST00000540166 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 TFDP3Q5H9I0 405 aa8.82□□□□□ -1
DDB1-217ENST00000540166 IFNLR1Q8IU57 520 aaPredicted RBP8.82□□□□□ -1
DDB1-217ENST00000540166 DAW1Q8N136 415 aa8.82□□□□□ -1
DDB1-217ENST00000540166 ACTL9Q8TC94 416 aa8.82□□□□□ -1
DDB1-217ENST00000540166 HSPH1Q92598 858 aa8.82□□□□□ -1
DDB1-217ENST00000540166 PPP1R10Q96QC0 940 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 COQ7Q99807 217 aa8.82□□□□□ -1
DDB1-217ENST00000540166 MSTO1Q9BUK6 570 aa8.82□□□□□ -1
DDB1-217ENST00000540166 C1QTNF1Q9BXJ1 281 aa8.82□□□□□ -1
DDB1-217ENST00000540166 KLC2Q9H0B6 622 aa8.82□□□□□ -1
DDB1-217ENST00000540166 NXF1Q9UBU9 619 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 STK39Q9UEW8 545 aa8.82□□□□□ -1
DDB1-217ENST00000540166 AGO2Q9UKV8 859 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 PADI4Q9UM07 663 aa8.82□□□□□ -1
DDB1-217ENST00000540166 PRPF19Q9UMS4 504 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 PRRC2BQ5JSZ5 2229 aaKnown RBP8.82□□□□□ -1
DDB1-217ENST00000540166 H0YCG3 227 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ENPP3O14638 875 aa8.81□□□□□ -1
DDB1-217ENST00000540166 LYPLA1O75608 230 aaPredicted RBP8.81□□□□□ -1
DDB1-217ENST00000540166 GRK2P25098 689 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TUFMP49411 452 aaKnown RBP8.81□□□□□ -1
DDB1-217ENST00000540166 EMP3P54852 163 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TPTEP56180 551 aa8.81□□□□□ -1
DDB1-217ENST00000540166 GNA12Q03113 381 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ANKDD1AQ495B1 522 aa8.81□□□□□ -1
DDB1-217ENST00000540166 CCDC14Q49A88 953 aa8.81□□□□□ -1
DDB1-217ENST00000540166 PPP6R3Q5H9R7 873 aaPredicted RBP8.81□□□□□ -1
DDB1-217ENST00000540166 SPOCD1Q6ZMY3 1216 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms