RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 DCP2Q8IU60 420 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 CNDP2Q96KP4 475 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 TBATAQ96M53 351 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 TARS2Q9BW92 718 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 HEMGNQ9BXL5 484 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 UPF3AQ9H1J1 476 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 DCLRE1BQ9H816 532 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ERAP1Q9NZ08 941 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 VPS13AQ96RL7 3174 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 TLL1O43897 1013 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 HBP1O60381 514 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 GAS8O95995 478 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PIGRP01833 764 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 UBTFL6P0CB48 400 aaPredicted RBP12.81□□□□□ -0.36
DDX55-206ENST00000539934 ITGA2P17301 1181 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 SMPD1P17405 629 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 TNFRSF8P28908 595 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 MAGEA11P43364 429 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ARSDP51689 593 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PLIN5Q00G26 463 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 MXD4Q14582 209 aaPredicted RBP12.81□□□□□ -0.36
DDX55-206ENST00000539934 NAB2Q15742 525 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 AARDQ4LEZ3 155 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 RTP2Q5QGT7 225 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PAPD7Q5XG87 772 aaKnown RBP12.81□□□□□ -0.36
DDX55-206ENST00000539934 FAM205BPQ63HN1 556 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PIGWQ7Z7B1 504 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ARHGEF19Q8IW93 802 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 CCDC33Q8N5R6 958 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 CHPT1Q8WUD6 406 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 TOE1Q96GM8 510 aaKnown RBP12.81□□□□□ -0.36
DDX55-206ENST00000539934 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 GPR88Q9GZN0 384 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 TOPORSQ9NS56 1045 aaPredicted RBP12.81□□□□□ -0.36
DDX55-206ENST00000539934 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 IL33O95760 270 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 BAG2O95816 211 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 FUCA1P04066 466 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 SRGAP2CP0DJJ0 459 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PCSK2P16519 638 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 KLRC1P26715 233 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 HOXC12P31275 282 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 STX2P32856 288 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 RALGPS2Q86X27 583 aaPredicted RBP12.81□□□□□ -0.36
DDX55-206ENST00000539934 CCDC36Q8IYA8 594 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PPM1KQ8N3J5 372 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 FBXL13Q8NEE6 735 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ADAMTS16Q8TE57 1224 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 TRAPPC12Q8WVT3 735 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 BIRC8Q96P09 236 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 MSTO1Q9BUK6 570 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 S100A14Q9HCY8 104 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 FAM8A1Q9UBU6 413 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PCDHGA10Q9Y5H3 936 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 STYXL1Q9Y6J8 313 aa12.81□□□□□ -0.36
DDX55-206ENST00000539934 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 ZBTB42B2RXF5 422 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 CACNB4O00305 520 aaPredicted RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 VILLO15195 856 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 TGDSO95455 350 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 CYP3A5P20815 502 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 IDUAP35475 653 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 POU3F4P49335 361 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 ACOT2P49753 483 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 EFNA5P52803 228 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 LAMTOR4Q0VGL1 99 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SLC14A2Q15849 920 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SETMARQ53H47 684 aaPredicted RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 KRBOX4Q5JUW0 171 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 DUPD1Q68J44 220 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 GTF2IRD2BQ6EKJ0 949 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 GTF2IRD2Q86UP8 949 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 RHPN2Q8IUC4 686 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 ZBTB45Q96K62 511 aaPredicted RBP12.8□□□□□ -0.36
DDX55-206ENST00000539934 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 DPH5Q9H2P9 285 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SP110Q9HB58 689 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 IGKV6-21A0A0C4DH24 114 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 H0Y858 1186 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 BTN3A1O00481 513 aa12.8□□□□□ -0.36
DDX55-206ENST00000539934 SLC7A4O43246 635 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms