RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 C19orf43Q9BQ61 176 aa12□□□□□ -0.49
VTN-202ENST00000539746 HERPUD2Q9BSE4 406 aa12□□□□□ -0.49
VTN-202ENST00000539746 PABPC3Q9H361 631 aaKnown RBP12□□□□□ -0.49
VTN-202ENST00000539746 MED4Q9NPJ6 270 aa12□□□□□ -0.49
VTN-202ENST00000539746 TRPV5Q9NQA5 729 aa12□□□□□ -0.49
VTN-202ENST00000539746 ABCB8Q9NUT2 735 aa12□□□□□ -0.49
VTN-202ENST00000539746 NSMCE4AQ9NXX6 385 aa12□□□□□ -0.49
VTN-202ENST00000539746 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
VTN-202ENST00000539746 TTLL3Q9Y4R7 772 aa12□□□□□ -0.49
VTN-202ENST00000539746 GBF1Q92538 1859 aa12□□□□□ -0.49
VTN-202ENST00000539746 A0A087WUV0 522 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 GOLGA6L7A0A1B0GV03 622 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ESYT3A0FGR9 886 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 HEPACAM2A8MVW5 462 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 KCNK1O00180 336 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 GLP2RO95838 553 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 PABPC1P11940 636 aaKnown RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 GJA1P17302 382 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 HOXD9P28356 352 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 POLR2LP62875 67 aaKnown RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 WASHC5Q12768 1159 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 NAB1Q13506 487 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 KCNJ11Q14654 390 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 DHCR24Q15392 516 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 SKIV2LQ15477 1246 aaKnown RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 TRIP13Q15645 432 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 KLHL38Q2WGJ6 581 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 PLEKHG6Q3KR16 790 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ITPRIPL2Q3MIP1 535 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 BEND6Q5SZJ8 279 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 ALG1LQ6GMV1 187 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 GRAMD4Q6IC98 578 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 TPGS1Q6ZTW0 290 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 TMC3Q7Z5M5 1100 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 CCDC25Q86WR0 208 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 CFAP52Q8N1V2 620 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 RIBC1Q8N443 379 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 NAT8LQ8N9F0 302 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ITFG1Q8TB96 612 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 CCDC110Q8TBZ0 833 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ADAMTS19Q8TE59 1207 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 DNASE1L2Q92874 299 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 HLA-CQ95604 372 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 MSLNLQ96KJ4 702 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 GDAP1L1Q96MZ0 367 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 AGAP3Q96P47 875 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 FAM118BQ9BPY3 351 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ROPN1BQ9BZX4 212 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 S1PR5Q9H228 398 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 C8orf33Q9H7E9 229 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 ATP13A3Q9H7F0 1226 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 FBRSQ9HAH7 460 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ROPN1Q9HAT0 212 aaPredicted RBP11.99□□□□□ -0.49
VTN-202ENST00000539746 ZDHHC18Q9NUE0 388 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 GRHL1Q9NZI5 618 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 HACD3Q9P035 362 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ZNF212Q9UDV6 495 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 FETUBQ9UGM5 382 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 GGA2Q9UJY4 613 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 ATP8A1Q9Y2Q0 1164 aa11.99□□□□□ -0.49
VTN-202ENST00000539746 TRDMT1O14717 391 aaKnown RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 SOCS5O75159 536 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 PRAMEF12O95522 483 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 GSRP00390 522 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 FGF1P05230 155 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 POLBP06746 335 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 ALADP13716 330 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 FOSL2P15408 326 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 GGCXP38435 758 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 SERPINH1P50454 418 aaKnown RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 SUOXP51687 545 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 RHOAP61586 193 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 NTHL1P78549 312 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 ECT2LQ008S8 904 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 STAT4Q14765 748 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 GRIN2CQ14957 1233 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 STXBP5Q5T5C0 1151 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 CXorf57Q6NSI4 855 aaKnown RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 FBXO38Q6PIJ6 1188 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 CYS1Q717R9 158 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 SPRED2Q7Z698 418 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 LMNTD2Q8IXW0 634 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 LRRN4CLQ8ND94 238 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 PPHLN1Q8NEY8 458 aaKnown RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 UBLCP1Q8WVY7 318 aaPredicted RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 SCG3Q8WXD2 468 aaKnown RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 CPT1BQ92523 772 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 PRCCQ92733 491 aaPredicted RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 IMP4Q96G21 291 aaKnown RBP11.98□□□□□ -0.49
VTN-202ENST00000539746 FEM1CQ96JP0 617 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 MGME1Q9BQP7 344 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 OSBPL1AQ9BXW6 950 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 ETNK1Q9HBU6 452 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 CLEC1BQ9P126 229 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 HS3ST2Q9Y278 367 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 SNX10Q9Y5X0 201 aa11.98□□□□□ -0.49
VTN-202ENST00000539746 RFXAPO00287 272 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms