RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CD68P34810 354 aaPredicted RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 KPNA1P52294 538 aaPredicted RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 EPHB3P54753 998 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ERVFC1P60507 584 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 TEX44Q53QW1 395 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 NLRP9Q7RTR0 991 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 TMEM150AQ86TG1 271 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ATPAF2Q8N5M1 289 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ATP11CQ8NB49 1132 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 USP33Q8TEY7 942 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 HERVK_113Q902F9 699 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 PIH1D1Q9NWS0 290 aaKnown RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 IGSF9Q9P2J2 1179 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZFP69BQ9UJL9 534 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 IGLV3-10A0A075B6K4 115 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 WASH4PA8MWX3 477 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 MAFKO60675 156 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 KRT4P19013 534 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 AFMIDQ63HM1 303 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 SPRED2Q7Z698 418 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 CHSY1Q86X52 802 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 CIR1Q86X95 450 aaPredicted RBP17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 GPR65Q8IYL9 337 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 TEX9Q8N6V9 391 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 SP7Q8TDD2 431 aaPredicted RBP17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 PSMG2Q969U7 264 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 TSGA13Q96PP4 275 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 GORASP1Q9BQQ3 440 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 FRMD8Q9BZ67 464 aaPredicted RBP17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF334Q9HCZ1 680 aaPredicted RBP17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 SSU72Q9NP77 194 aaKnown RBP17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 NPHS2Q9NP85 383 aa17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 PPARGC1AQ9UBK2 798 aaKnown RBP17.39■□□□□ 0.38
PCDHB17P-201ENST00000539533 DOCK4Q8N1I0 1966 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 MTSS1O43312 755 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZWINTO95229 277 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 RHOQP17081 205 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 CCNCP24863 283 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 MAGEA3P43357 314 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 PAPOLAP51003 745 aaKnown RBP17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 GEMIN4P57678 1058 aaKnown RBP17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 COG7P83436 770 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 OLIG2Q13516 323 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 FYB2Q5VWT5 728 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 KLHDC10Q6PID8 442 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZNF419Q96HQ0 510 aaPredicted RBP17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 RPRD1AQ96P16 312 aaPredicted RBP17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 DENND2DQ9H6A0 471 aaPredicted RBP17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 RABGEF1Q9UJ41 708 aa17.39■□□□□ 0.37
PCDHB17P-201ENST00000539533 AHCYL1O43865 530 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 FESP07332 822 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 NEFHP12036 1026 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 PTPN4P29074 926 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 MTDHQ86UE4 582 aaKnown RBP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 MPP5Q8N3R9 675 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CNTD1Q8N815 330 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TTC8Q8TAM2 541 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TEKT5Q96M29 485 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CYP2S1Q96SQ9 504 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TCF25Q9BQ70 676 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TRIM56Q9BRZ2 755 aaKnown RBP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TLE6Q9H808 572 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TMEM248Q9NWD8 314 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 STK39Q9UEW8 545 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 LNPEPQ9UIQ6 1025 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 RANBP2P49792 3224 aaKnown RBP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 NYNRINQ9P2P1 1898 aaKnown RBP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 DRGXA6NNA5 263 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 HIDE1A8MVS5 230 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 KLKB1P03952 638 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 NFKB1P19838 968 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 TACR2P21452 398 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 DNAJB1P25685 340 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 SLC6A4P31645 630 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CTNNB1P35222 781 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 BMPR1AP36894 532 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CREMQ03060 361 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CBLBQ13191 982 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 LILRA6Q6PI73 481 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CLNKQ7Z7G1 428 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 DENND1CQ8IV53 801 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CFAP52Q8N1V2 620 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 UMODL1-AS1Q8N2C9 162 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZNF398Q8TD17 642 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 WBP2Q969T9 261 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CFAP36Q96G28 342 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 SIGLEC10Q96LC7 697 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 KLHL5Q96PQ7 755 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 SAR1AQ9NR31 198 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 CPSF2Q9P2I0 782 aaKnown RBP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 RPL26L1Q9UNX3 145 aaKnown RBP17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 SSX2IPQ9Y2D8 614 aa17.38■□□□□ 0.37
PCDHB17P-201ENST00000539533 DPPA5A6NC42 116 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 H0Y3Z8 333 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ACSL4O60488 711 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ENTPD5O75356 428 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ADRA1DP25100 572 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms