RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CXCL12P48061 93 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 SARNPP82979 210 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 MESP2Q0VG99 397 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 STAT4Q14765 748 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ARHGAP17Q68EM7 881 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 OLFML1Q6UWY5 402 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 TRIM48Q8IWZ4 208 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 OR2I1PQ8NGU4 316 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CCHCR1Q8TD31 782 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CSPG4P5Q96PW8 444 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CDK5RAP1Q96SZ6 601 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 ACAT2Q9BWD1 397 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 GPR88Q9GZN0 384 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 KLC2Q9H0B6 622 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 POLMQ9NP87 494 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 DNAJC28Q9NX36 388 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 BFARQ9NZS9 450 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CLEC1BQ9P126 229 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 G3BP2Q9UN86 482 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 SCML2Q9UQR0 700 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 MTF2Q9Y483 593 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 ATRXP46100 2492 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ARID1BQ8NFD5 2236 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 CHURC1-FNTBB4DL54 471 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 RIOK3O14730 519 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 AVILO75366 819 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ALDH1A2O94788 518 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 RASGRP1O95267 797 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 IGSF6O95976 241 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 KDELR1P24390 212 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 FNTBP49356 437 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 INCA1Q0VD86 236 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 SFSWAPQ12872 951 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 TFDP3Q5H9I0 405 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PDE12Q6L8Q7 609 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 APTXQ7Z2E3 356 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 TRMT11Q7Z4G4 463 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 ANKRD42Q8N9B4 389 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ZNF669Q96BR6 464 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 ASB16Q96NS5 453 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 UBXN6Q9BZV1 441 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 EPHX3Q9H6B9 360 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PCDH18Q9HCL0 1135 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ARGLU1Q9NWB6 273 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 NFU1Q9UMS0 254 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CRYL1Q9Y2S2 319 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 NCF1BA6NI72 391 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 OR2AG2A6NM03 316 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 NCF1CA8MVU1 366 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 DCXO43602 365 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 NCF1P14598 390 aaPredicted RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 CCNB1P14635 433 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PDIA2Q13087 525 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 FAM151BQ6UXP7 276 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 DPY19L3Q6ZPD9 716 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 C15orf39Q6ZRI6 1047 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 UBE2Q1Q7Z7E8 422 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 PCGF5Q86SE9 256 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 CHST14Q8NCH0 376 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 WFDC5Q8TCV5 224 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 OR8D1Q8WZ84 308 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 ATP6V1E2Q96A05 226 aa7.37□□□□□ -1.23
MSH6-209ENST00000538136 R3HDM2Q9Y2K5 976 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 TDRKHQ9Y2W6 561 aaKnown RBP7.37□□□□□ -1.23
MSH6-209ENST00000538136 CARNS1A5YM72 827 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 MID1O15344 667 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 EGFP01133 1207 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CTHP32929 405 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CLDN2P57739 230 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 SNRPD1P62314 119 aaKnown RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 TJAP1Q5JTD0 557 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 FAM171BQ6P995 826 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 BZW1Q7L1Q6 419 aaKnown RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 ZNF761Q86XN6 746 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 RCOR2Q8IZ40 523 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 PDIK1LQ8N165 341 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 PYROXD1Q8WU10 500 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CCT6BQ92526 530 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 KLHL25Q9H0H3 589 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 OTOL1A6NHN0 477 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 NRG2O14511 850 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 CLDN11O75508 207 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 DAB1O75553 588 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 LUC7L3O95232 432 aaKnown RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 ELFN1P0C7U0 828 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 ALDH4A1P30038 563 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 SLC6A4P31645 630 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CCNHP51946 323 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 MLLT6P55198 1093 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 SIM2Q14190 667 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 SETMARQ53H47 684 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 ANKRD20A8PQ5CZ79 823 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 FBXO48Q5FWF7 155 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 PIK3R6Q5UE93 754 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 KCTD16Q68DU8 428 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 MON1BQ7L1V2 547 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CHST15Q7LFX5 561 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 TMEM110Q86TL2 294 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CXorf40AQ8TE69 158 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms