RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 PCDHB9Q9Y5E1 797 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 DCCP43146 1447 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 TM9SF1O15321 606 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 KIF1CO43896 1103 aaKnown RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 PIAS1O75925 651 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 GOT1P17174 413 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 MAD2L1Q13257 205 aaPredicted RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 CLEC17AQ6ZS10 378 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 NIPA1Q7RTP0 329 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 VPS33AQ96AX1 596 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 KLHL4Q9C0H6 718 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 GANQ9H2C0 597 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 TRIT1Q9H3H1 467 aaKnown RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ZFP14Q9HCL3 533 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 CFAP97Q9P2B7 532 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 INVSQ9Y283 1065 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 FAM153BP0C7A2 387 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 FAM153CQ494X1 144 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 FAM98BQ52LJ0 330 aaKnown RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 WNT8BQ93098 351 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ZYG11BQ9C0D3 744 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 USP32Q8NFA0 1604 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 PIPSLA2A3N6 862 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 LRATO95237 230 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 PABPC1P11940 636 aaKnown RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 C16orf72Q14CZ0 275 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ATP13A4Q4VNC1 1196 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 POMZP3Q6PJE2 187 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 HTATIP2Q9BUP3 242 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 SPRTNQ9H040 489 aaPredicted RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ATP13A3Q9H7F0 1226 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 BRD9Q9H8M2 597 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 MRPL39Q9NYK5 338 aaKnown RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 SLC12A4Q9UP95 1085 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 CCNB1P14635 433 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 SERPINB1P30740 379 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 IL2P60568 153 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 DUSP4Q13115 394 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 XKR6Q5GH73 641 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 SH3GL1Q99961 368 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 OSER1Q9NX31 292 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 MSCO60682 206 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 GP5P40197 560 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 CREMQ03060 361 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 BIKQ13323 160 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 C11orf88Q6PI97 169 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 MAGEC3Q8TD91 643 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 PROX1Q92786 737 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 REXO4Q9GZR2 422 aaKnown RBP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 SERHLQ9NQF3 203 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ADPRHL2Q9NX46 363 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 OR10H1Q9Y4A9 318 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 HACD1B0YJ81 288 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 OPLAHO14841 1288 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 DNTTP04053 509 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 MMP3P08254 477 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 KCNA10Q16322 511 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 NEK10Q6ZWH5 1172 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 FAM126BQ8IXS8 530 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 FBXO30Q8TB52 745 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 LENG9Q96B70 501 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ZBTB22O15209 634 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 HIST1H2ABP04908 130 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 OR1D2P34982 312 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 NOS2P35228 1153 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 MAMLD1Q13495 774 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 RAPSNQ13702 412 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 HIST3H2AQ7L7L0 130 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 FAM129CQ86XR2 697 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 EID3Q8N140 333 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 CACTIN-AS1Q8N1I8 211 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 SELENOMQ8WWX9 145 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 HIST1H2ACQ93077 130 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 C2orf49Q9BVC5 232 aaPredicted RBP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 SLC9A3R1O14745 358 aaPredicted RBP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 CNOT3O75175 753 aaKnown RBP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 MAFO75444 373 aaPredicted RBP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 EPN2O95208 641 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 KCNH1O95259 989 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 GLUD1P00367 558 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 CALB2P22676 271 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ITGA7Q13683 1181 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 ZBTB49Q6ZSB9 765 aa11.33□□□□□ -0.6
LINC00346-201ENST00000538077 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms