RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 AHSGP02765 367 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 HLA-DQB2P05538 268 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ENO3P13929 434 aaPredicted RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 RPL17P18621 184 aaKnown RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 FCGRTP55899 365 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 USP46P62068 366 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 FKBP1BP68106 108 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ASPHQ12797 758 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 TUSC3Q13454 348 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PCBP1Q15365 356 aaKnown RBP eCLIP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 WLSQ5T9L3 541 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 LAYNQ6UX15 382 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 RIPOR1Q6ZS17 1223 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 NAT14Q8WUY8 206 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 SOCS4Q8WXH5 440 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 DNAJC9Q8WXX5 260 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 C7orf26Q96N11 449 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 NAT9Q9BTE0 207 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ACE2Q9BYF1 805 aaPredicted RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 IGSF9Q9P2J2 1179 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 RCOR3Q9P2K3 495 aaPredicted RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 KCTD3Q9Y597 815 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ZCWPW2A0A1B0GU75 182 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 NVLO15381 856 aaKnown RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 SIN3BO75182 1162 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 TBX10O75333 385 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 UBTFL6P0CB48 400 aaPredicted RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 MLNP12872 115 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 GRIA4P48058 902 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 DSC2Q02487 901 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PPHLN1Q8NEY8 458 aaKnown RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 FBXO32Q969P5 355 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 OR52B2Q96RD2 323 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 DDX50Q9BQ39 737 aaKnown RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 GATA5Q9BWX5 397 aaPredicted RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PRM3Q9NNZ6 103 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 XPR1Q9UBH6 696 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PTCH2Q9Y6C5 1203 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF638Q14966 1978 aaKnown RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 A0A0U1RQS6 177 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 E9PAM4 449 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PSMG1O95456 288 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 IDH3AP50213 366 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PKNOX1P55347 436 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 COG7P83436 770 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF789Q5FWF6 425 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 XKR4Q5GH76 650 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 PPM1LQ5SGD2 360 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 SAPCD2Q86UD0 394 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 SERINC5Q86VE9 423 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ULK2Q8IYT8 1036 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 MAPK15Q8TD08 544 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ZNF398Q8TD17 642 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
UBE3B-208ENST00000538070 GORASP1Q9BQQ3 440 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ACBD6Q9BR61 282 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 TUBB6Q9BUF5 446 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 DCLRE1BQ9H816 532 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 GLOD4Q9HC38 313 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 SLC24A3Q9HC58 644 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 OSER1Q9NX31 292 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 ARHGEF38Q9NXL2 777 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 STOML1Q9UBI4 398 aa8.84□□□□□ -0.99
UBE3B-208ENST00000538070 FAM95CA0A1B0GW59 222 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 HHLA1C9JL84 531 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TRIM13O60858 407 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 AOC2O75106 756 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TRPA1O75762 1119 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 GSTA2P09210 222 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 MAGEA6P43360 314 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 NUDT2P50583 147 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 COPAP53621 1224 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 LIMK2P53671 638 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
UBE3B-208ENST00000538070 WNT3AP56704 352 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TBX4P57082 545 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 PRAMEP78395 509 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 SLC10A7Q0GE19 358 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 ALFQ53S48 1182 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 CNSTQ6PJW8 725 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TMPRSS6Q8IU80 811 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 NT5C3BQ969T7 300 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 PSMG2Q969U7 264 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
UBE3B-208ENST00000538070 CATSPERBQ9H7T0 1116 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 MTF2Q9Y483 593 aaPredicted RBP8.83□□□□□ -1
UBE3B-208ENST00000538070 HS3ST4Q9Y661 456 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 A0A0U1RQF3 1178 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 ATP6AP2A0A1C7CYW4 349 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 UBA6A0AVT1 1052 aaPredicted RBP8.83□□□□□ -1
UBE3B-208ENST00000538070 IRAK2O43187 625 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 ATP6AP2O75787 350 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TGDSO95455 350 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 ZCCHC18P0CG32 403 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 HAPLN1P10915 354 aaPredicted RBP8.83□□□□□ -1
UBE3B-208ENST00000538070 CNTFP26441 200 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 CCNFP41002 786 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 TAF12Q16514 161 aa8.83□□□□□ -1
UBE3B-208ENST00000538070 ARL13AQ5H913 290 aaPredicted RBP8.83□□□□□ -1
UBE3B-208ENST00000538070 RBM20Q5T481 1227 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms