RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 CSH2P0DML3 217 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 CD1EP15812 388 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 FGFR3P22607 806 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 IDUAP35475 653 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 NOMO3P69849 1222 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 SLC10A2Q12908 348 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 KCNJ11Q14654 390 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 MTERF2Q49AM1 385 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 N4BP2L1Q5TBK1 243 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 TXNRD3NBQ6F5E7 133 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 KCTD8Q6ZWB6 473 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 ZBTB46Q86UZ6 589 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 ANKRD13BQ86YJ7 626 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 ABRAQ8N0Z2 381 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 NPLOC4Q8TAT6 608 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 ZSCAN18Q8TBC5 510 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 RCN3Q96D15 328 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 ASB9Q96DX5 294 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 SH3YL1Q96HL8 342 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 HOXD1Q9GZZ0 328 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 PDZD7Q9H5P4 517 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 SNX13Q9Y5W8 968 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 ST14Q9Y5Y6 855 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 CDY1Q9Y6F8 540 aa11.53□□□□□ -0.56
SEMA4D-221ENST00000537934 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 A8MU76 341 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 TRIM38O00635 465 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 SLC22A2O15244 555 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 PLIN3O60664 434 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 MAPTP10636 758 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 ENO3P13929 434 aaPredicted RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 MLLT10P55197 1068 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 RPL7AP62424 266 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 DYNLT1P63172 113 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 RHDQ02161 417 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 SLC9B1Q4ZJI4 515 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 CELF3Q5SZQ8 465 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 FAAH2Q6GMR7 532 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 ANKFN1Q8N957 763 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 FAM71DQ8N9W8 422 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 MFSD2AQ8NA29 543 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 USP33Q8TEY7 942 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 CAPSLQ8WWF8 208 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 TOP1MTQ969P6 601 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 MED30Q96HR3 178 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 KIFC3Q9BVG8 833 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 CYP26B1Q9NR63 512 aa11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 DNMT3BQ9UBC3 853 aaKnown RBP11.52□□□□□ -0.56
SEMA4D-221ENST00000537934 CROCCQ5TZA2 2017 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 IGKV6D-21A0A0A0MT36 114 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 TTC34A8MYJ7 566 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 F8VP50 259 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 CHADO15335 359 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 ZC3H11AO75152 810 aaKnown RBP eCLIP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 GLRA3O75311 464 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 SNAI1O95863 264 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 VDRP11473 427 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 NR4A1P22736 598 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 GRIA3P42263 894 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 NME5P56597 212 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 SNRPFP62306 86 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 PERM1Q5SV97 790 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 SLC9A4Q6AI14 798 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 SIGIRRQ6IA17 410 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 BBS12Q6ZW61 710 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 HEATR4Q86WZ0 1026 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 OR13F1Q8NGS4 319 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 ACMSDQ8TDX5 336 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 DUS3LQ96G46 650 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 ZNF486Q96H40 463 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 SPATA33Q96N06 139 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 GPR20Q99678 358 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 GPN2Q9H9Y4 310 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 PLAC1Q9HBJ0 212 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 POPDC2Q9HBU9 364 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 PSME2Q9UL46 239 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 CNTNAP2Q9UHC6 1331 aa11.52□□□□□ -0.57
SEMA4D-221ENST00000537934 STX16-NPEPL1H3BU86 382 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 CST8O60676 142 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 GNAO1P09471 354 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 CNTFP26441 200 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 OPRL1P41146 370 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 ADCYAP1R1P41586 468 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 STAT5BP51692 787 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 CRHR2Q13324 411 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 ART3Q13508 389 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
SEMA4D-221ENST00000537934 PACRGLQ8N7B6 248 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms