RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PCDH8O95206 1070 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 CD160O95971 181 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 PRNPP04156 253 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 GIMD1P0DJR0 217 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 CDK4P11802 303 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
USP28-203ENST00000537490 CLCN6P51797 869 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 CLDN2P57739 230 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 NOMO3P69849 1222 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 ARF5P84085 180 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 FGL2Q14314 439 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 NAA35Q5VZE5 725 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 SEL1L3Q68CR1 1132 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 C22orf39Q6P5X5 142 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 ERN2Q76MJ5 926 aaKnown RBP8.64□□□□□ -1.03
USP28-203ENST00000537490 PHLDB2Q86SQ0 1253 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 FAM131BQ86XD5 332 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 EMC1Q8N766 993 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 OR13H1Q8NG92 308 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 GRIN3AQ8TCU5 1115 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 BMFQ96LC9 184 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 CCDC114Q96M63 670 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 BBC3Q96PG8 261 aaPredicted RBP8.64□□□□□ -1.03
USP28-203ENST00000537490 HAPLN3Q96S86 360 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 HDAC8Q9BY41 377 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 MAGEB5Q9BZ81 275 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 DYRK4Q9NR20 520 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 KLHL11Q9NVR0 708 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 UCKL1Q9NWZ5 548 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 IL36AQ9UHA7 158 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 PAXBP1Q9Y5B6 917 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 ARID1BQ8NFD5 2236 aaPredicted RBP8.64□□□□□ -1.03
USP28-203ENST00000537490 ASXL3Q9C0F0 2248 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 COL5A1P20908 1838 aaPredicted RBP8.64□□□□□ -1.03
USP28-203ENST00000537490 ANKRD11Q6UB99 2663 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 F8VZ95 297 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 TLX3O43711 291 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 GJB6O95452 261 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 LSM8O95777 96 aaKnown RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 PAK4O96013 591 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 CYP1A1P04798 512 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 CHRNB2P17787 502 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 HNRNPA2B1P22626 353 aaKnown RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 DGKAP23743 735 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ACP1P24666 158 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ITPKBP27987 946 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 AKT2P31751 481 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 HNF1BP35680 557 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ACVRL1P37023 503 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 RECQLP46063 649 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 KLK7P49862 253 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 SERPINH1P50454 418 aaKnown RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 DNA2P51530 1060 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ATP11AP98196 1134 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 INSM1Q01101 510 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 SEMG2Q02383 582 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 GNA12Q03113 381 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 SLC20A2Q08357 652 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 CCDC15Q0P6D6 951 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 ILKQ13418 452 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ZNF542PQ5EBM4 170 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 CARD16Q5EG05 197 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 TCP11X2Q5H9J9 407 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ACBD5Q5T8D3 534 aaPredicted RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 RETSATQ6NUM9 610 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ZNF783Q6ZMS7 281 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 GCNT7Q6ZNI0 430 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ARCQ7LC44 396 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ABI3BPQ7Z7G0 1075 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 DRC7Q8IY82 874 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 SLC22A18ASQ8N1D0 253 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 SLC20A1Q8WUM9 679 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 RXFP2Q8WXD0 754 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 HEPHQ9BQS7 1158 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 CALN1Q9BXU9 219 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ZYG11BQ9C0D3 744 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 GANQ9H2C0 597 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ATP13A1Q9HD20 1204 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 METTL5Q9NRN9 209 aaKnown RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 TMEM51Q9NW97 253 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 TAB2Q9NYJ8 693 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 CHMP5Q9NZZ3 219 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 PPARGC1AQ9UBK2 798 aaKnown RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
USP28-203ENST00000537490 FADS3Q9Y5Q0 445 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 AK5Q9Y6K8 562 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 ZZEF1O43149 2961 aa8.63□□□□□ -1.03
USP28-203ENST00000537490 DOCK9Q9BZ29 2069 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 POM121BA6NF01 834 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FAM72CH0Y354 149 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 RAD51BO15315 384 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 FFAR2O15552 330 aa8.62□□□□□ -1.03
USP28-203ENST00000537490 PIAS2O75928 621 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms