RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	DPT	Q07507	201 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	PMPCA	Q10713	525 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	STIM1	Q13586	685 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	KCTD2	Q14681	263 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	PLK5	Q496M5	336 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	STRIP1	Q5VSL9	837 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	PRSS45	Q7RTY3	260 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	GPAT4	Q86UL3	456 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	IGFN1	Q86VF2	1251 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	ADSSL1	Q8N142	457 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	BOLL	Q8N9W6	283 aa	Known RBP	5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	C11orf65	Q8NCR3	313 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	ZMIZ2	Q8NF64	920 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	GDPD5	Q8WTR4	605 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	FRG2B	Q96QU4	278 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	HIPK3	Q9H422	1215 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	ATP8A2	Q9NTI2	1148 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	C20orf141	Q9NUB4	165 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	CTNNAL1	Q9UBT7	734 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	LIMA1	Q9UHB6	759 aa	Known RBP	5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	PCDHGB5	Q9Y5G0	923 aa		5.76	□□□□□ -1.49
PRKDC-208	ENST00000536710	AOX1	Q06278	1338 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	MANSC4	A6NHS7	340 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	C2CD4B	A6NLJ0	364 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	KRTAP9-7	A8MTY7	169 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	SNAP23	O00161	211 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	RHOD	O00212	210 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	FIBP	O43427	364 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	HNRNPCL1	O60812	293 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	SEC14L2	O76054	403 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	MAPK4	P31152	587 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ICAM3	P32942	547 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	BSG	P35613	385 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	MLH1	P40692	756 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ARSF	P54793	590 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	RPL7A	P62424	266 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	YWHAZ	P63104	245 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	HSF1	Q00613	529 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	TFF2	Q03403	129 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	VEPH1	Q14D04	833 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	TAF11	Q15544	211 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	RPE65	Q16518	533 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	MEA1	Q16626	185 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ME3	Q16798	604 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ALG10	Q5BKT4	473 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ALG10B	Q5I7T1	473 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	LCE4A	Q5TA78	99 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	VWA5B1	Q5TIE3	1220 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	IKBIP	Q70UQ0	350 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	SLC46A3	Q7Z3Q1	461 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	WDR5B	Q86VZ2	330 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	C8orf58	Q8NAV2	365 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	CADM4	Q8NFZ8	388 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ZNF398	Q8TD17	642 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	SMARCE1	Q969G3	411 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ITPA	Q9BY32	194 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	RIOX1	Q9H6W3	641 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	SEPT11	Q9NVA2	429 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	GRHL1	Q9NZI5	618 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	KIAA1456	Q9P272	454 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	HSPB7	Q9UBY9	170 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	CDH22	Q9UJ99	828 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	UTS2R	Q9UKP6	389 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	SLC45A1	Q9Y2W3	748 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710	KCNE2	Q9Y6J6	123 aa		5.75	□□□□□ -1.49
PRKDC-208	ENST00000536710		A0A0A0MQY5	61 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	GTPBP1	O00178	669 aa	Known RBP	5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	LDLRAD4	O15165	306 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	TGFB1I1	O43294	461 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	SLC25A17	O43808	307 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	PTP4A3	O75365	173 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	C1QL1	O75973	258 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	LAMP2	P13473	410 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	SLC2A4	P14672	509 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	BLK	P51451	505 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	CYP4A11	Q02928	519 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	GOLGA8DP	Q0D2H9	430 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	TMEM115	Q12893	351 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	MED22	Q15528	200 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	SLC9C1	Q4G0N8	1177 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	SERTAD4-AS1	Q5TG53	156 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	CDC73	Q6P1J9	531 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	GGN	Q86UU5	652 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	CMAS	Q8NFW8	434 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	USP6NL	Q92738	828 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	NUF2	Q9BZD4	464 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	GHITM	Q9H3K2	345 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	AAMDC	Q9H7C9	122 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	PDGFC	Q9NRA1	345 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	KLHL13	Q9P2N7	655 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	FBXO40	Q9UH90	709 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	VPS28	Q9UK41	221 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	CORO1C	Q9ULV4	474 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	LAMP3	Q9UQV4	416 aa		5.74	□□□□□ -1.49
PRKDC-208	ENST00000536710	CLDN16	Q9Y5I7	305 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms